Gene Cla_0047 details

Gene Information

• Locus tag: Cla_0047
• ID: 7410608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 46766
• End bp: 47380
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 643717183
• Product: conserved hypothetical protein (DUF285 domain protein)
• Protein accession: YP_002574665
• Protein GI: 222823092
• TIGRFAM ID: [TIGR02167] bacterial surface protein 26-residue repeat

Plasmid Coverage information

• Num covering plasmid clones: 58
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAAAG TTAAAAACAA AAATGAGTTG ATGAAATTAG TGCAAAATGA AAGAATTTCT 
TTAAGAGATA TTGATGTATC TTTGATAGAA GATTTTTCAT TTGTTTTTTA TTGTTCTATT 
AGAAAAGATT TCTTGGGTAT TGAGCGTTGG GATGTATCTA AAGCTAAAGA TATGTCTTAT 
ATGTTTTATT GTTGTGAAAG TTTTAATGCA GACTTATCAC GCTGGGATGT TTCAAATGTT 
GAAAATATGG CAAGTATGTT TTTTAACTGC AAAAATTTCA ACAAAGACTT ATCAAGATGG 
AATACACAAA ATTTAAAAGA TATGTCTTAT ATGTTTTTTA ATTGTGTTAA ATTTAATCAT 
TCTTTATTGC GCTGGAAAAC CTCTAATGTA ATCAGAATGG CACATTGTTT TGAAAACTGC 
CATGCATATG AACATAATGT GGCAAGCTGG GATGTGCAAA ATGTAATTAC CATGGCCTAT 
CTTTTCCATA ATTGTAAAAA TTTTCACCAC GAGTTAGATG AGTGGAATAT CCAAAGAGAT 
TGTAATACTG ATAAAATGTT TGGAAACCGT GGTATTGATA AACTTTATGC TGTAAAAGGC 
GTGGAGCTAA AATAA 

 

Protein sequence

MYKVKNKNEL MKLVQNERIS LRDIDVSLIE DFSFVFYCSI RKDFLGIERW DVSKAKDMSY 
MFYCCESFNA DLSRWDVSNV ENMASMFFNC KNFNKDLSRW NTQNLKDMSY MFFNCVKFNH 
SLLRWKTSNV IRMAHCFENC HAYEHNVASW DVQNVITMAY LFHNCKNFHH ELDEWNIQRD 
CNTDKMFGNR GIDKLYAVKG VELK