Gene Cla_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0039 
Symbol 
ID7410600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp40831 
End bp41667 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content30% 
IMG OID643717175 
Productcation ABC transporter, periplasmic cation-binding protein 
Protein accessionYP_002574658 
Protein GI222823085 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTAT TGTTTTTGTG TTTGATTTCA TTTTTAAGTA TATACGCCAA AGATTTAGTA 
AGTGTTAGTA TAGCCCCACA AGCTTATTTT GTACAGCAAA TTGCCAAAGA TACTTTGGAT
ATAAATATAG TCATACCACC TAATGCAAAT GAGCATACTT TCGAATTTAA ACCAAGTGGT
ATTTTAAAAC TTGAAAAAAG CGATATTTAC TTCACAGCCA ATTTAGAATT TGAAAAAATT
TGGATTTTAA AACTTAAAGA TAATCTCAAA AACACCAAAA TCATCTCTAC TCAAAATGGT
ATTAATTTTT TACCTTTGCA AGATCATGCT CACGAAGGAC ACCATCACCA TGGAGATGAC
CCTCACACAT GGCTTGATCC GCTTTTAGCA AAAACTCATG CTAAAAATAT CACCCTAGCA
CTTATAGAAC AATACCCACA AAATAAAGCA TTTTATGAAC AAAATTTAGA AAATTTCTTA
AAAGAAATGG ATGCATTAAA TTTACAAATA CAAGCTTTAT TTAAAAATGC AAAAAACAAA
CATTTTCTAG TCTATCATCC ATCTTGGGGG TATTTTGCAA AAAGATATCA TCTAAGCCAA
ATTCCTGTAG AAATAGAAGG CAAAGAACCT AAGCCAAAAG ACCTAGCCAA GCTTGCAAAA
CTCATACAAA AAGAGCAAAT AAAAGCTATT TTTGTACCTA AAGGAGCTAA TAACAATACT
ATTAAAGCTA TGGCGAGTAG TTATAATCTT AAAATCATAG AACTTGATCA TTTGCCAAAT
GATTATAAAA ATGAGCTTTT AAAAGATGCA AAAAATATAG CAAGCGTTTT ACAATGA
 
Protein sequence
MRVLFLCLIS FLSIYAKDLV SVSIAPQAYF VQQIAKDTLD INIVIPPNAN EHTFEFKPSG 
ILKLEKSDIY FTANLEFEKI WILKLKDNLK NTKIISTQNG INFLPLQDHA HEGHHHHGDD
PHTWLDPLLA KTHAKNITLA LIEQYPQNKA FYEQNLENFL KEMDALNLQI QALFKNAKNK
HFLVYHPSWG YFAKRYHLSQ IPVEIEGKEP KPKDLAKLAK LIQKEQIKAI FVPKGANNNT
IKAMASSYNL KIIELDHLPN DYKNELLKDA KNIASVLQ