Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0039 |
Symbol | |
ID | 7410600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 40831 |
End bp | 41667 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643717175 |
Product | cation ABC transporter, periplasmic cation-binding protein |
Protein accession | YP_002574658 |
Protein GI | 222823085 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGTAT TGTTTTTGTG TTTGATTTCA TTTTTAAGTA TATACGCCAA AGATTTAGTA AGTGTTAGTA TAGCCCCACA AGCTTATTTT GTACAGCAAA TTGCCAAAGA TACTTTGGAT ATAAATATAG TCATACCACC TAATGCAAAT GAGCATACTT TCGAATTTAA ACCAAGTGGT ATTTTAAAAC TTGAAAAAAG CGATATTTAC TTCACAGCCA ATTTAGAATT TGAAAAAATT TGGATTTTAA AACTTAAAGA TAATCTCAAA AACACCAAAA TCATCTCTAC TCAAAATGGT ATTAATTTTT TACCTTTGCA AGATCATGCT CACGAAGGAC ACCATCACCA TGGAGATGAC CCTCACACAT GGCTTGATCC GCTTTTAGCA AAAACTCATG CTAAAAATAT CACCCTAGCA CTTATAGAAC AATACCCACA AAATAAAGCA TTTTATGAAC AAAATTTAGA AAATTTCTTA AAAGAAATGG ATGCATTAAA TTTACAAATA CAAGCTTTAT TTAAAAATGC AAAAAACAAA CATTTTCTAG TCTATCATCC ATCTTGGGGG TATTTTGCAA AAAGATATCA TCTAAGCCAA ATTCCTGTAG AAATAGAAGG CAAAGAACCT AAGCCAAAAG ACCTAGCCAA GCTTGCAAAA CTCATACAAA AAGAGCAAAT AAAAGCTATT TTTGTACCTA AAGGAGCTAA TAACAATACT ATTAAAGCTA TGGCGAGTAG TTATAATCTT AAAATCATAG AACTTGATCA TTTGCCAAAT GATTATAAAA ATGAGCTTTT AAAAGATGCA AAAAATATAG CAAGCGTTTT ACAATGA
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Protein sequence | MRVLFLCLIS FLSIYAKDLV SVSIAPQAYF VQQIAKDTLD INIVIPPNAN EHTFEFKPSG ILKLEKSDIY FTANLEFEKI WILKLKDNLK NTKIISTQNG INFLPLQDHA HEGHHHHGDD PHTWLDPLLA KTHAKNITLA LIEQYPQNKA FYEQNLENFL KEMDALNLQI QALFKNAKNK HFLVYHPSWG YFAKRYHLSQ IPVEIEGKEP KPKDLAKLAK LIQKEQIKAI FVPKGANNNT IKAMASSYNL KIIELDHLPN DYKNELLKDA KNIASVLQ
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