Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0013 |
Symbol | recJ |
ID | 7410574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 12254 |
End bp | 13825 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643717149 |
Product | single-stranded-DNA specific exonuclease |
Protein accession | YP_002574632 |
Protein GI | 222823059 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAATA AAGCTAAAAT AAAAGAAATT TTACACCAGC GTTTTATCAA CGATACGCAT GTGAAGCTTT GTGATCTACC TATGCCATCT TGCTTAAAAG ATGTCTATAA GGGTGCTTTG CGTATCAAAG AAGCGATTGA GAAAAATCAA AAACTTGCTA TTGTTGGAGA TTATGATGTA GATGGGGTGA TTTCTTGTGT GATTTTATCT GAATTTTTTG ATGATATTGG TTATGATTAT GTGGTAAAAA TTCCAAATCG TTTTAAAGAC GGATATGGTT TAAATGAAGA AATTATCAAT GAACTTGATG GGGTAGATTT AATCATCACT GTAGATAATG GCATAGCAGC ATTTGATGCA GCAGAGCTTT GTTTACAAAA AGGAATTGAC TTAATCATCA CTGATCATCA TATGCCTCCA GCTATTTTAC CAAAAGCTTA TGCAATTATT AACCCTAAAC AACAAGATTG CGATTTTCCT GATATTGAAA TTTGTGGGGC TCAAGTGGCT TGGTATTTAG TCGCTGCGAT AAAAGAAGTG TGTAAGATTA ATTATAATAT GTGTAAATTT ATAGAGCTTT TATCTATCGC GATTATCGCA GATATGATGG AGCTTAGAGA TTTAAACAGA GCCTTAGTTA GAAAAGGTAT AGAATGTATT AATGACTCTA AACGAGTGGC ATTTAAAGCG ATCAAGCAGT ATTTTGGTAA GGATAAATTT GAACTTGATA ATATCAGCTT TTTAATTGCA CCTTTGATTA ATAGTGCAGG TAGAATGGAT GATGCAATTA TTTCTTATAA ATTTTTACAT TCTAAAAATA TCGATGAGGT TATGGGTTAT TTAGAACAAA TCATTACTTA TAATAATAGC CGTAAAGATG AAGAACGAGA GCTTTTTAAG CAGTGTTTAG AACAAGTTGA TGAAAATGAT CCTGTGATTA TTGTCAATGG GCAAAATTGG CATGAGGGTG TTTTGGGTAT AGTTGCAAGT CGTTTGGTAA AGCATTTTAA CAAACCTGCC TTTGTTTTTT CAGAATGTGA GCAAAAGGCT AAGGCTAGCG TTAGAAGTGT AGGTAGGATA GATATTTTAA ATGTTATAGA ACAAGCTAAA GAATTTGTTT TAAGCTATGG TGGGCATAAA GGTGCAGCTG GAGTTTTAGT AGAACTTGAA AAATTTGGTG TTTTTAAAAG TAAGCTTTAT GAAATTTGTC AAAATATCCC TAAAGATGAT TTTTACAATG CTGATGAGGT TTTGGGTAGT ATTGATCCAA ATGAAGTTGA TTTTGAACTT TTAGAGATAT TAGAATTTTT TGAGCCTTTT GGGCATAAAA ATCCAAGGCC GTATTTTAAA TTTGATAAGC TTTTTGTAAA AAATAAAAGA AAGCTAGGTA AAGATGAAAA TCATATGAAG CTTATTTTAA CTCAAGGAAA TAAAACTTTA GAAGCTTTAT TTTTTAATTT TGACTATGAG CCAGAGCTTG GAGAAAGCAT TGATCTTATA GCTAGTGTTT CTAAAAATAA TTTTAGAGGA TTAATCACCC CGCAACTTAC TATAAAAGAA ATTCTTAGAT AA
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Protein sequence | MLNKAKIKEI LHQRFINDTH VKLCDLPMPS CLKDVYKGAL RIKEAIEKNQ KLAIVGDYDV DGVISCVILS EFFDDIGYDY VVKIPNRFKD GYGLNEEIIN ELDGVDLIIT VDNGIAAFDA AELCLQKGID LIITDHHMPP AILPKAYAII NPKQQDCDFP DIEICGAQVA WYLVAAIKEV CKINYNMCKF IELLSIAIIA DMMELRDLNR ALVRKGIECI NDSKRVAFKA IKQYFGKDKF ELDNISFLIA PLINSAGRMD DAIISYKFLH SKNIDEVMGY LEQIITYNNS RKDEERELFK QCLEQVDEND PVIIVNGQNW HEGVLGIVAS RLVKHFNKPA FVFSECEQKA KASVRSVGRI DILNVIEQAK EFVLSYGGHK GAAGVLVELE KFGVFKSKLY EICQNIPKDD FYNADEVLGS IDPNEVDFEL LEILEFFEPF GHKNPRPYFK FDKLFVKNKR KLGKDENHMK LILTQGNKTL EALFFNFDYE PELGESIDLI ASVSKNNFRG LITPQLTIKE ILR
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