Gene Athe_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2401 
Symbol 
ID7408024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2552299 
End bp2553666 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content35% 
IMG OID643716763 
ProductUDP-N-acetylmuramate/alanine ligase 
Protein accessionYP_002574242 
Protein GI222530360 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGT ATTTTTTCAT TGGTATTGGT GGAATATCAA TGAGTGCAAT CGCTTTAATA 
CTCAAAAACC AAGGTTTTTG GGTTGAAGGT TCTGACATGC AGGAAAGCGC CACTACAAAG
ATGCTAAGAG AAAATGGAAT AAATGTATAT ATTGGACATG ATGAGAGTCA CATACACGGC
GATGAAACTG TAATATACAC CGCGGCAATT TCAAAAGACA ATCCCGAACT TTTAGCAGCA
AAGAGGATGA ATCTGAAAAT CTATGAGCGG GCAGAATTTT TAGGGCTTTT GATGAAAGAT
TTTAAAAATG TCATTACAAT CTCAGGGACG CATGGAAAAA CAACTACAAC CTCTATGATT
GGTTACATCC TAAAAAAAGC AAATTATAAC CCTACAGTTC TGGTAGGTGC ATTTGTAAAA
CAGCTTGGTG GAAATTTTGT GATTGGTTCT AAAGAATACC TTGTTGTTGA AGCATGTGAA
TATGTGGATA GCTTTTTAAA GTTCAACCCT ACAATTGGAG TTATTTTAAA CATTGATAAT
GACCATTTGG ACTATTTCAA AGATATAGAT TCAATAAAAA ACTCTTTTAA AAAGTTCGCA
CAGAAAATTC CAACTTCAGG GTTTTTAGTA GTAAACTATG ACGATAAAAA TGTTAAAGAT
ATTATAAATC AGCTCAACAC ACAGATAATT TGTATATCCA CAAAAGAAAA AACTGACATT
TTTGCCGACA ATATTAGCTG TAGTGATGGA TACTATGAAT TTGACGTTAA AAATAATAAC
GACGAGATTT TAGCTCATAT AAAACTCAAC ATTCCTGGTT TTCATAACGT CTATAATGCG
CTCGCTGCAT TTGCAGTTGC ATCAAAGTTG GGAGTAGAAA GTATTACAAT TGAACAAGCT
CTCTCTGAAT TCCGTGGTGC TTCGCGCAGG CTTGAAAAGG TAGGAGAGTT TAATGGTATA
TACCTCTATG ATGACTATGC TCACCATCCA ACCGAAATCA AGGCAACACT TGCTACCCTG
AAAAAGATCT CTGAAGGAAA GGTTCTTGCC ATATTCCAAC CGCATACATT TTCAAGGCTT
AAAACTCTTT TGAACGAATT TGCTGAGAGC TTGCAGTTGG CTGACAAGGT TATTGTCACA
GATGTATATG CCGCACGTGA AAAAAATGTT TTTGGAATTA CATCTGAAAA GCTTTATTTG
AAACTAAAAG AAATTGGAAT TGACTGTGAG TATATAAGCA ACTTTGAAGA TATTGCCTGT
TATGCAGTAA AAGAAGCAAA AAAAGGTGAC ATCATTGCAA CCATTGGCGC AGGTGATATA
AACAAATGTT TGGACATTAT TCTCAAAAAA GCTGTTGTAA AATCATAA
 
Protein sequence
MNKYFFIGIG GISMSAIALI LKNQGFWVEG SDMQESATTK MLRENGINVY IGHDESHIHG 
DETVIYTAAI SKDNPELLAA KRMNLKIYER AEFLGLLMKD FKNVITISGT HGKTTTTSMI
GYILKKANYN PTVLVGAFVK QLGGNFVIGS KEYLVVEACE YVDSFLKFNP TIGVILNIDN
DHLDYFKDID SIKNSFKKFA QKIPTSGFLV VNYDDKNVKD IINQLNTQII CISTKEKTDI
FADNISCSDG YYEFDVKNNN DEILAHIKLN IPGFHNVYNA LAAFAVASKL GVESITIEQA
LSEFRGASRR LEKVGEFNGI YLYDDYAHHP TEIKATLATL KKISEGKVLA IFQPHTFSRL
KTLLNEFAES LQLADKVIVT DVYAAREKNV FGITSEKLYL KLKEIGIDCE YISNFEDIAC
YAVKEAKKGD IIATIGAGDI NKCLDIILKK AVVKS