Gene Athe_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2155 
Symbol 
ID7408348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2287595 
End bp2288377 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content33% 
IMG OID643716520 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_002574003 
Protein GI222530121 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.71741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATA TTATTAACGC TTTTTTAAAT AGTTCATATA TATTTTTTCT TGTACTTGCA 
AGGATGAGTG GTCTTTTTAT AGTCTCACCA ATATTTGGTA GAAGAAATAT ACCTGCGTAT
TTTAAAATTG GTTTTGCTTT TTTCTTAAGC TTACTTGTTG TCTCAACTTA CAGATTTTCT
TACAGTGCAC CTTCCAATTT GCTGGAGTAT ATATTTGTAG TGATTAAAGA ATTCATTGTT
GGGCTTTTGA TAGGGTATAT ATCATACATG ATATTTTCAG CTATACTTTT GGCGGGTCAA
ATCATTGACA ATGCAATAGG TTTTGGTATG GCAAACGTCA TTGACCCTAT GAGTGAGGTT
CAGGTTCCTC TTTTAGGAAA CTTTTTATAC CTTTATATGC TTGTTGTCTT TTTTGGAACA
GACGCTCATC ATCTTCTTAT AAGAGCTGTA ATTTATAGCT ACAAGCTTGT ACCTATTGGA
TATGAAGGTT TTAGAAGAGA ATTTACTTGG AATTTTTTTA GATTTTTTTC AGAGCTTTTC
TTGATAGGGG TTGAGATAAG CCTGCCAATT TTAATGAGCA TGCTTATTGT GGACATAATT
TTAGCTGTGT TGTCACGAGC AGTTCCACAG ATGAATGTGT TCATGGTAGG GCTTCCTATA
AAGATTGCAA TTGGTTTTTT GGTGCTTGTT ATAATTTTTC CTTTCATGAA CAAGATGATA
TTTGTACTAA TTGACAAAAT AGCTGTATAT ACTTTTGAAA CCTTGAGAGG GGGTATCAGG
TGA
 
Protein sequence
MTDIINAFLN SSYIFFLVLA RMSGLFIVSP IFGRRNIPAY FKIGFAFFLS LLVVSTYRFS 
YSAPSNLLEY IFVVIKEFIV GLLIGYISYM IFSAILLAGQ IIDNAIGFGM ANVIDPMSEV
QVPLLGNFLY LYMLVVFFGT DAHHLLIRAV IYSYKLVPIG YEGFRREFTW NFFRFFSELF
LIGVEISLPI LMSMLIVDII LAVLSRAVPQ MNVFMVGLPI KIAIGFLVLV IIFPFMNKMI
FVLIDKIAVY TFETLRGGIR