| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1938 |
|---|
| Symbol | |
|---|
| ID | 7407352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 2044226 |
|---|
| End bp | 2046691 |
|---|
| Gene Length | 2466 bp |
|---|
| Protein Length | 821 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643716310 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_002573798 |
|---|
| Protein GI | 222529916 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.199019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATAG TTTTCTTAGG TGGTGCTAAA GAGGTTGGTG CGTCTTGTGT TTTAATAAAA
GCTGGTGGCA AGAACATCTT AATTGACTCT GGTATAAGAA TGAAAGAAGA CAAGCTCCCA
AACTTGCAAC TTCTTCGCGA GCTTGGCGGT GTTGATGTTT GTCTTATTTC GCATGCTCAC
CTTGACCATA TAGGAAGCCT TCCTCTAATT GCAAGAGAGT ATCCTCATAT TTTCTTTTAT
GCAAATCAGC CAACAAAAGA TTTGATAAAG GTACTTTTGT ATGATAGCTT GAGGATAATG
GAGATTGCAG AGGATGAAAT ACCTATTTAT GCTGAGAAAA ATGTAGAAGA TTTGCTTGAT
AGAACCCTTA CCTATGGATT TAACTATACA TTTGAACCCA TTGAAGGGAT TAAGGTAACA
TTTTTCCCGG CAGGCCATAT CCTTGGTGCT TCCATGATAT TTATTCAGAC TCAAGAAGGC
AGCATACTTT ACACAGGCGA CTTTTCAGCA GACAGACAGT TGACTGTTGA CAAAGCTTCA
GTTCCCAAAA TTAGACCTGA TGTTGTCATA TGTGAATCAA CCTATGGTGA CAGGCTTCAC
ACAAACAGAA ATTTTGAAGA AGAAAGGCTT TTTAACACAG TAGCAGAGGT TATATCTCAA
GGTGGAAAGG TTTTAATTCC TGCTTTTGCG ATTGGAAGAG CTCAGGAGAT TATTCTTATC
CTCAGAAACT ATATGAAAAA AAGAAAGGTC AGTTTTAATG TTTTCATTGA TGGAATGGTA
AGGGAAGTTA TAAGAGTTTA TAGAAATAAC CCTACTTATT TGTCTTCGCG ATATTACAAG
AGAGTGTTAA AAGGAGAAGA AATATTTTTC GCAGATAATA TAAATGTTGT ATCTGACAAA
AAACAAAGAG AGGAAATAAT TTCTTCTTCA GACCCATGTG TTATAATCTC AAGCTCGGGT
ATGCTCACAG GAGGACCTTC TGTTTTTTAT GCTGAAAAGA TTGTACAGAG TCAAAATGCG
CTGATTGCAA TAACAGGGTA TCAAGACGAA GAAGCGCCTG GAAGAAAACT TCTTGAACTT
GCCGAACTTC CGGAGAATGA GAGAAAGATT GAGCTAAATG GCAAAGAATA TGAAGTAAAG
TGCAGGGTTG AAAAGTATGG GCTTTCAGCA CATAGCGACA GAGATAGAAT ACTTGGATTT
TTGGCAACGC TCAGACCAAG GACGGTCATT TTTGCACATG GCAGTGAAGA TGCAATTTTG
CAGATTTCGG ATATGGCAGT AAAGGAGCTT GAAGCAAATA TAATTGTTCC GCAAAATGGT
GAGATAAATT CAATTTCAAT TGAAAAGCCA AGAAAGCAGC TATCATTTTT CAATGTTAAG
AAACTGAACA ATCAAGAACT TTTAAATGAA GAGAACTTGA AACTTTTGTG GCAGTACCTT
GTAGAGAATA AACAAGAGTC AAATCACATA ACTGCTGAAC ATGCCATTTT GATTTGGAAT
GGAAAAGAAT TTTTAGAAAA AGATGAAGTA AATAGGGTAT TTGAACTCTT AAAGAAGTCG
GTTTATTTTG AACAAAACCC CAGAAAACCC TACCTATTTA GAATTTTATC TGCCCAAGAG
GTAGAAGAAA GGTTAAAGCC AAAGCCTATG GAGCAGAACA AAATGCGAGA GCTTGCATTT
GGAATGTTTT CAGAATATGG ACTGTATAAG GTTGGTATGG ATATTGAAAA CAAAGTGGTT
ACATTTTACT TTCACTTTCC AGCAGTTTCA AAAAAGATTG AAGAAAAAAT AAAAGAATTT
GAAAACTTGA CACTCTGGAA GGTTGATATA AATCCTAATG TCAATCTCAC GTATGCTTCA
GAATATATTA AAAATGTTCT AAAAGGTTAT AATGTAAATT TGTTGAAATT TTCATATAAT
CCAGTTATAA ACGCTATTGT GGCAAGAATA AAAGAAGATT TTGAAGAAAT GAAGACAGTA
TCTGAGAAAT TTTTAGAAGA AACTGGAGTT AGCCTGATAT TTGATGTGGA GGGCAAAAAA
CAAGAAGAAA AGATAGATTT GCAAAAGCCA AGGATGGAGC AAAACAAAGC ACTTCTTTTG
ATTGACCTCT ATTTTGAAAA TGAAAAAGAT AAAATTTACA AAAAAAGTAT TAAAGAAGGT
GGAAAATATA TAGAACTTTC GTTTGTGACA CCTTTTGTGG GTGAGAGGTA TAAAGACAAG
ATTGAGGAAC TCTCAGAGAA AACCGGCTGG GATATAAAAG TGTCTCAGTC AATAAATCAG
GTTGAGATGA TAAATATACT AAAAGAGATA TTGTCGAAAT ACAGTATAGA GATTCAAAAA
AATCCCAGCA TTTATCCTTC AACAAGAGAG GTAAAGATAA AACTAAGTGA AGGGGTACAG
GAAGAAATTT TAAAAAAAAT ATCAGATGAA TTTTTTGAAA GGACGGGATT TTACATTAAA
ATTTAA
|
|---|
| Protein sequence | MEIVFLGGAK EVGASCVLIK AGGKNILIDS GIRMKEDKLP NLQLLRELGG VDVCLISHAH
LDHIGSLPLI AREYPHIFFY ANQPTKDLIK VLLYDSLRIM EIAEDEIPIY AEKNVEDLLD
RTLTYGFNYT FEPIEGIKVT FFPAGHILGA SMIFIQTQEG SILYTGDFSA DRQLTVDKAS
VPKIRPDVVI CESTYGDRLH TNRNFEEERL FNTVAEVISQ GGKVLIPAFA IGRAQEIILI
LRNYMKKRKV SFNVFIDGMV REVIRVYRNN PTYLSSRYYK RVLKGEEIFF ADNINVVSDK
KQREEIISSS DPCVIISSSG MLTGGPSVFY AEKIVQSQNA LIAITGYQDE EAPGRKLLEL
AELPENERKI ELNGKEYEVK CRVEKYGLSA HSDRDRILGF LATLRPRTVI FAHGSEDAIL
QISDMAVKEL EANIIVPQNG EINSISIEKP RKQLSFFNVK KLNNQELLNE ENLKLLWQYL
VENKQESNHI TAEHAILIWN GKEFLEKDEV NRVFELLKKS VYFEQNPRKP YLFRILSAQE
VEERLKPKPM EQNKMRELAF GMFSEYGLYK VGMDIENKVV TFYFHFPAVS KKIEEKIKEF
ENLTLWKVDI NPNVNLTYAS EYIKNVLKGY NVNLLKFSYN PVINAIVARI KEDFEEMKTV
SEKFLEETGV SLIFDVEGKK QEEKIDLQKP RMEQNKALLL IDLYFENEKD KIYKKSIKEG
GKYIELSFVT PFVGERYKDK IEELSEKTGW DIKVSQSINQ VEMINILKEI LSKYSIEIQK
NPSIYPSTRE VKIKLSEGVQ EEILKKISDE FFERTGFYIK I
|
|---|
| |