Gene Athe_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1892 
Symbol 
ID7409005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2000885 
End bp2001844 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content37% 
IMG OID643716264 
ProductNLP/P60 protein 
Protein accessionYP_002573753 
Protein GI222529871 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAA AAAGTTTAAT AGCTATAATT CTTGGAATTT TTTTGATGTT TTTTTCTGCA 
AAGGTCTTTG CCCAGTCAGC CCAGGCAAAA TCTACAATAA ATATAAGAAG CGCACCTTCA
ACAAGTAGTA AGATTTTAGG AGTTTTCCCC AAAGGGTTTA AAGCCCAAGT TTTGTCAAAT
GCAGGTGGAT GGGTAAAGAT TTCGTATGAT GGAATTGTTG GGTATGTAAA GTCTGATTAC
ATAACTATTA CAAATGAAAA AAGGAGTGCA GTTTCAAATA CTTCAAGGGC AAGTGTTGCA
AAAACGGCTG CTAAAGCTGC GCAAGCTACA GTTTTAAAAG ACAATGCGCG CTTAAGAAGT
GATATGTCAA CCACATCAAA GGTGCTAAAG ACATTAAAAA ATGGTAGCAA GGTGTATGTC
CTGTCAAGAG AACAAAATGG CTGGGTGAAG GTAAAGACGC TTGATGGCAC AGTAGGATAT
ATGGCTTATT ACCTTTTGAA GATGCCATCG CAGCTTGTAT CAAAAACAGT GTCACGTGGT
GGGTTTGAAA GAAGTCAAGC AGAAACTTTT ACAAATCTTA GCTTGGCACA GAGAATTTTG
GAGTTTGCTC AAAGATTTCG TGGTATAAGA TACTCATACG GTGGAACATC GCCATCAACT
GGTTTTGACT GTTCAGGATT TGTTCAGTTT GTGTTCAAAA ACTTTGGAAT AAATTTAGAA
AGAACAGCAG CTGACATGGC AAAAACAAAT GGTGTGAGAG TTTCATATAG TGAAATTAAA
CCGGGAGATT TGCTTTTCTT TGACACAGAT GGCGGGAAAA ATTATATAAA TCATGTTGGC
ATATATTTAG GCGGTGGCAA GTTCATTCAT GCATCAAGTG CAAGGGGACG TGTAACAGAA
ACTGACCTAA ATTCATATTA TGGAAGATTT TTTATGATGG CAAAAAGAGT CATAAGATGA
 
Protein sequence
MNLKSLIAII LGIFLMFFSA KVFAQSAQAK STINIRSAPS TSSKILGVFP KGFKAQVLSN 
AGGWVKISYD GIVGYVKSDY ITITNEKRSA VSNTSRASVA KTAAKAAQAT VLKDNARLRS
DMSTTSKVLK TLKNGSKVYV LSREQNGWVK VKTLDGTVGY MAYYLLKMPS QLVSKTVSRG
GFERSQAETF TNLSLAQRIL EFAQRFRGIR YSYGGTSPST GFDCSGFVQF VFKNFGINLE
RTAADMAKTN GVRVSYSEIK PGDLLFFDTD GGKNYINHVG IYLGGGKFIH ASSARGRVTE
TDLNSYYGRF FMMAKRVIR