Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_1883 |
Symbol | |
ID | 7408996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | - |
Start bp | 1990342 |
End bp | 1991397 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643716255 |
Product | twitching motility protein |
Protein accession | YP_002573744 |
Protein GI | 222529862 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000175789 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTA ATTCAATTCT CAAAGAAGCA TTTCTCAAGG AGGCTTCAGA TATACATATT ACACCAGGTG TTCCTCCAAT TTATCGAATA CACGGCAGAT TAGTACGGAC AGATGATTCA ATTCTGACCC CTGAGATGGT GGAGGAGTTC GTGCGACAGA TCACCAACGA AAACCAGTTT AAAATTCTTG AGCAGAAAGG TGAGATAGAC TTTTCTTACG GCATAAAAGG TGTAAGCAGA TTTAGAGTAA ATGTTTATAA ACAAAGAGGG TCATATTCTA TAGCTTTTAG AATAATTCCA GTAAATATAC CACCATTTGA GACACTTGGT CTTCCACCAG TTTTGAAAGA ATTTACAAAA TTGAATAAAG GGCTTGTTTT AGTTACAGGT CCAACCGGTT CGGGTAAGTC AACAACACTA GCATCGCTGA TTGACATAAT CAACAAAGAA AGAGATGTGC ATATAATCAC ATTAGAGGAT CCAATAGAGT ATTTGCATAG ACACAACAAG AGTATTATCA ATCAAAGAGA GATAGGTAGT GACACGCTCA GCTTTGCAGA CGCGCTGAGG GCGGCTTTGA GAGAAGATCC TGACGTAATC CTTGTTGGTG AGATGAGAGA TTTGGAGACA ATTGCAATAG CTTTAACAGC TGCTGAAACA GGACACCTAG TGTTTTCCAC ACTTCACACA ATTGGAGCGG CAAAGACAAT AGACCGTATC ATTGACGTTT TTCCACCGTA TCAACAGCAG CAGATAAGAA TTCAGCTATC AACTGTTTTG CAGGGAGTAG TGTCTCAGCA GCTTTTGACC CGTCGTGATG GTAAAGGCAG GGTTGTTGCA ACAGAGGTAA TGATAGTAAA TCCGGCCATA AGAAACCTCA TTAGGGAGGC TAAAACGTAT CAGATTCAAT CAATTATTCA GACGCATCAG CGACAGGGCA TGATAACAAT GGAGCAGTCA CTCATAGACT TGTACAAACG AGGGTTTATT ACCCGTGAAG ATGCGTTCAA CTATGCTACT GACTTTGATT TTATGCAAAG ACTGCTCAGT GCATAA
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Protein sequence | MDINSILKEA FLKEASDIHI TPGVPPIYRI HGRLVRTDDS ILTPEMVEEF VRQITNENQF KILEQKGEID FSYGIKGVSR FRVNVYKQRG SYSIAFRIIP VNIPPFETLG LPPVLKEFTK LNKGLVLVTG PTGSGKSTTL ASLIDIINKE RDVHIITLED PIEYLHRHNK SIINQREIGS DTLSFADALR AALREDPDVI LVGEMRDLET IAIALTAAET GHLVFSTLHT IGAAKTIDRI IDVFPPYQQQ QIRIQLSTVL QGVVSQQLLT RRDGKGRVVA TEVMIVNPAI RNLIREAKTY QIQSIIQTHQ RQGMITMEQS LIDLYKRGFI TREDAFNYAT DFDFMQRLLS A
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