| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1680 |
|---|
| Symbol | |
|---|
| ID | 7409188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 1769576 |
|---|
| End bp | 1770274 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643716049 |
|---|
| Product | RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily |
|---|
| Protein accession | YP_002573547 |
|---|
| Protein GI | 222529665 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAAGTA GGGCTAAAAA TGGTGATAAA CTTGCACGCC AGCAGTTGAT AGAAAACAAT
CTTGCGCTTG TGTGGAGTGT TGTAAAAAAG TTTGCTGCAA AAGGGGTAGA ACTTGAGGAT
TTGTTCCAGA TAGGCTCAAT AGGGCTTATA AAGGCTGTTG ACAGGTTTGA CCCGTCGTTT
AATGTCAGGT TTTCAACATA TGCTGTTCCT ATGATAATTG GTGAGATAAA AAGATATCTG
CGCGATGATG GCAAGATAAA GGTTTCACGA AAGATAAAAG AAAATCAGGG TAAAATAAAA
AAACTAAGAA ACCAGTTTGT ATCAAACCAT GGAAGAGAAC CCACAATCTC AGAGATTTCG
CAGTTGACAG GACTTTCAAA CGATGAGATT TTGCTTTGTT TGGATGCGTC ATCTGAGGTT
GCATCGCTGA GTGAAGTTAT AAATCAGGAA GAGGGAAAAC CTATCACGCT GATGGACATA
GCATCTGATG AAGAAGATTA TTCGACAAAA CTTTTGGATT TAATGGCACT AAAAGAAGGG
CTTAAAAAAT TAAAAGGACG GGAACGCTAC ATAATATTTA TGCGCTACTT CAAAAACAAA
ACACAATCTG AGATTGCAAA ACAGCTCAAT ATCTCCCAGG TGCATGTATC AAGGATTGAA
AAAAGAGCTT TGGAGAGGAT AAAAAGGGAG TTTGTTTGA
|
|---|
| Protein sequence | MISRAKNGDK LARQQLIENN LALVWSVVKK FAAKGVELED LFQIGSIGLI KAVDRFDPSF
NVRFSTYAVP MIIGEIKRYL RDDGKIKVSR KIKENQGKIK KLRNQFVSNH GREPTISEIS
QLTGLSNDEI LLCLDASSEV ASLSEVINQE EGKPITLMDI ASDEEDYSTK LLDLMALKEG
LKKLKGRERY IIFMRYFKNK TQSEIAKQLN ISQVHVSRIE KRALERIKRE FV
|
|---|
| |