| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1596 |
|---|
| Symbol | |
|---|
| ID | 7409426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 1688349 |
|---|
| End bp | 1690307 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 643715965 |
|---|
| Product | ATP-dependent OLD family endonuclease |
|---|
| Protein accession | YP_002573463 |
|---|
| Protein GI | 222529581 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTATATTA GTAAGATGAG AATAAGGAAT TATAAATCAT TTTTAGATTC AGGGGAGATA
ATGTTGGACG AAAAAATTTT TGCATTTATT GGACAAAATA ATACTGGAAA ATCCACTATA
TTAGATGCTG TAAAAGTATT TTTTCCCAAC TATAAGAAAC AAGTTGACAA GAAGGATATT
CATAGAGGTA TTAATGATAG CATTATTATT GAAATGTGGT TAGGCGGAGT AGAGTCTTTT
TTTGAAAATA CCCGTACAGA TGAAGTTGAT AGACAGGTAG AGAAATTGTT AAGTAAAGCT
GATGACAATT CTCTATATAT AAAGTTAGTA TTAAATATTG AAGACGGTAC CAACAAAAAT
ATTAGAAAAT ATTTTGACAA AGACGGAGAA GAGATAAAAG AAGCTACTTT AAAAAAATTA
CTTCCTGAGT TAGTAGTAAT ACCTGCCATA CGAGATCCAG AAAAAGAAAG TACAGCTGAC
CGCAAATCAT ATTTGAGGAG TTTAATTGAT ATCTTAGATA GTGAATATAA AACTGATATT
TTAATAAAAG ATGAAGGGGT AGAAAAAAGA GTTAATTACA GTCAATTGAA TGATATTCTT
ACCAAAGAAG CAAGGAAAAG GTGTGAAAGT TTGTCACAAA AAATAACGGA ATATTATAAC
AGTACATTAG GAAACAACAA TTTTAGAATA AATTTAGAAC CAACAGTGGA TATATATAGC
GCAACAAAAT ATAACACTAG CATAGTGGAG ATAATAGGGA ATGAAAAAAT AGAAAATGAC
ATCTTAAATT TCGGAACGGG TTATCAAAGT GTACTTATTC TTTCTATACT ACAGACGTAT
GTGGAAATAG CCCGTAGCGT AGGAAAGTAT ATATTTGTAA TTGAAGAACC AGAAATTTAT
TTACACCCAA ATCTTCAGAG AAAAATGATT GAAACATTAA TAAATATTTC AGAAAGAAAT
CAGGTAATTT TTACCTCACA CTCGCCTATA ACAATCAGTA ATCTACCAAA GAAGAATGTA
AAACTTGTCT TAAGAGAAAG AGAGAAATCA ATTGTTAAAG AGATAAATCC CAAAGAGGTT
ATAAATGAAT TAGGAATTAA AGCTGATGAT TTTCTCGGTA GCAAAGGGAT CATCTTTGTT
GAAGGTAAAG ATGATTTTGA AGTTGTGCGA GAATTAATTT GTAAGCTTGA CGATAACTTA
TTAAACATGA TTAACGTAAT TCCTGTAAAT TCATGTTGTA ATCTAAAATT CTTTGCAAAT
GCAGAATTGT TTCTCAATAA ATATTTTGAA ATACCTGTTG TTATAATAAG AGATGCTGAT
ACAAATGATC CTGAAAAGCT TAAAAGTGAT TTTTTAAAGG AAATGTTTGA ATTTATTAAG
CAATATGAAT TTGCTGATTC GGAAATTGTT GAGAAAAAGA AAAAATTAGT GCAAAATACA
AATATTCTTC AGCATTATTC GATAGAATAT TATTTTCTTA ATGAGCTTTT TTTAAAAGAT
TATTATGATT ATTATCATGA TAACCCGAAA AGCTTAGAAA TAGCAATTAC CTGTTATAAG
TGTAAGTACA ATCTATTAAT AGATAAAGTC CGTAAAAATC AAATGAGTAA AGAAGAATTT
GCTAAATTAT ATCAACCAAA AAGATTTTTA AAAGGGTTTC TGGATAAAAA TACTAATGAA
AGAGAAAGAT ATGAGATGTA TTTTAAAGAA AAATGGGAAA AATTGTTTGA TAGTTGTGCT
TGTGAGGATG TTGACGAAAG AAAAAATAAT TTCTTCAAAG TGAGAGATAA TATTATCCAG
AACATATCGA TTAAAAGAAA AGGTGAAAAG TCAACCTTTT ATACTGATGT TTTAAGGAAA
CATCATTTGC AGGAATTAGA AATGACGGAA CTTAACGAAG TAATTCAGAT ACTTAAGAAT
TTTGTTAATA CATTAATCAA GAATAATAAC AAAAGTTAG
|
|---|
| Protein sequence | MYISKMRIRN YKSFLDSGEI MLDEKIFAFI GQNNTGKSTI LDAVKVFFPN YKKQVDKKDI
HRGINDSIII EMWLGGVESF FENTRTDEVD RQVEKLLSKA DDNSLYIKLV LNIEDGTNKN
IRKYFDKDGE EIKEATLKKL LPELVVIPAI RDPEKESTAD RKSYLRSLID ILDSEYKTDI
LIKDEGVEKR VNYSQLNDIL TKEARKRCES LSQKITEYYN STLGNNNFRI NLEPTVDIYS
ATKYNTSIVE IIGNEKIEND ILNFGTGYQS VLILSILQTY VEIARSVGKY IFVIEEPEIY
LHPNLQRKMI ETLINISERN QVIFTSHSPI TISNLPKKNV KLVLREREKS IVKEINPKEV
INELGIKADD FLGSKGIIFV EGKDDFEVVR ELICKLDDNL LNMINVIPVN SCCNLKFFAN
AELFLNKYFE IPVVIIRDAD TNDPEKLKSD FLKEMFEFIK QYEFADSEIV EKKKKLVQNT
NILQHYSIEY YFLNELFLKD YYDYYHDNPK SLEIAITCYK CKYNLLIDKV RKNQMSKEEF
AKLYQPKRFL KGFLDKNTNE RERYEMYFKE KWEKLFDSCA CEDVDERKNN FFKVRDNIIQ
NISIKRKGEK STFYTDVLRK HHLQELEMTE LNEVIQILKN FVNTLIKNNN KS
|
|---|
| |