| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1314 |
|---|
| Symbol | |
|---|
| ID | 7408895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 1403064 |
|---|
| End bp | 1403900 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643715679 |
|---|
| Product | spermidine synthase |
|---|
| Protein accession | YP_002573187 |
|---|
| Protein GI | 222529305 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | [TIGR00417] spermidine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTGAGA TGGAACTTTG GTTTACCGAG CAACAGACTC CTGACTTGGG ATTTACATGC
AAGATAACAA AAACCATCTA CACAGCAAAG ACTCAATACC AAGACTTAGC AATACTTGAA
ACAAAACAGT TTGGCAGGAT GCTTGTACTG GACGGTGCTG TTCAGACAAC AATTGCAGAT
GAATTTTGTT ACCATGAGTT AATTTCTCAT GTTCCTTTAT TCACCCATCC AAATCCCAAA
AAGGTTGCTG TCATAGGTGG GGGAGACGGA GGAGTTATTA GAGAAATTCT CAAACATGAC
GAGGTTGAAA AGGCATATTT AATAGAGATT GATAGAGAAG TTATAGAAGC AAGCAAGAAA
TACCTTCCTG AGATAAGTTG TGCGCTTGAT GATGAAAGGG CAGAGGTCAT TATAACCGAT
GGAATAAAAT TTGTATCCGA GAACAAAAAT ATGTTTGATG TTATAATTGT GGATTCAACA
GACCCTGTTG GTCCTGCAGT GGGACTTTTT CAAGATAGTT TTTATAAGGC AGTGTTTGAA
TGCTTAAAAG AAGATGGGCT TTTTGTTGCA CAGACCGAGT CGCCTTTTTA TGATCAGGAC
CTGATAAAAA ATGTATTTCA CGCTGTGAAG TCCATTTTCC CAATAACAAG ACTTTATCTT
GGATTTATTC CAACGTATCC GAGCGGACTT TGGAGTTTTA CTCTTGGTTC TAAAAAGTAT
GACCCACTTG AGGTAGATGT TTCAAGGATA AAAAGGATTG ATACAAAGTA TTACAATCCA
GAGTTGCATA AAGCTCTATT TGCACTGCCA ACTTTTGTTC AAGAAATTAT AAAGTAA
|
|---|
| Protein sequence | MAEMELWFTE QQTPDLGFTC KITKTIYTAK TQYQDLAILE TKQFGRMLVL DGAVQTTIAD
EFCYHELISH VPLFTHPNPK KVAVIGGGDG GVIREILKHD EVEKAYLIEI DREVIEASKK
YLPEISCALD DERAEVIITD GIKFVSENKN MFDVIIVDST DPVGPAVGLF QDSFYKAVFE
CLKEDGLFVA QTESPFYDQD LIKNVFHAVK SIFPITRLYL GFIPTYPSGL WSFTLGSKKY
DPLEVDVSRI KRIDTKYYNP ELHKALFALP TFVQEIIK
|
|---|
| |