| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1299 |
|---|
| Symbol | |
|---|
| ID | 7408880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 1389002 |
|---|
| End bp | 1390741 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643715664 |
|---|
| Product | hydrogenase, Fe-only |
|---|
| Protein accession | YP_002573172 |
|---|
| Protein GI | 222529290 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
|---|
| TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.130328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGG TGAATATAAC AATAGATGGC AAGAAGATTC AGGTGCCAAA GGATTATACA
GTGCTTCAAG CAGCACGCGA AGCAGGAGTT GAGATTCCAA CCCTTTGTTA TCTAAAAGGT
ATAAATGAAA TTGGTGCTTG CAGAATGTGC GTTGTTGAAG TAAAAGGGGC AAGAAGCTTG
CAGGCTGCTT GTGTTTATCC TGTGTCAGAA GGCATGGAGG TCATCACAAA CAGTGAAAGG
GTAAGAAGAG CAAGAAAGGT TAATCTTGAA CTTATTCTTT CAAATCATGA CAGGAGCTGC
TTGACATGTG TCAGAAGTGG AAACTGTGAA CTTCAAAAAC TCGCAGAAGA TTTAAATGTT
AAGCAGATTA GATATGAAGG TGAAAATATA AGAAGACCTC TCGATGATTT TTCACCTTCT
GTTGTAAGAG ATCCAAATAA ATGTATACTT TGCAAAAGAT GTATAAATGT TTGCAGGAAT
GTTCAAGAGG TTGGAGTTAT TAATGCAAAT TACAGAGGTT TCAGAACAGT TATATCCACC
GCATTTGACA GAAGTTTGAA TGATGTTGCA TGTACAATGT GCGGTCAATG TATTCAGGCT
TGCCCAGTTG GAGCTTTAAG AGAGAAAGAC TCAACAGACA TTGTATGGAA GGCTTTAGCA
GACAAGAACA AATATGTTGT TGTTCAAGCG GCCCCAGCTG TGAGAGTTGC ACTTGGTGAA
GAGTTTGGAC TACCAATTGG TACAAGAGTT ACCGGCAAGA TGGTAACTGC TCTCAAGATG
CTTGGGTTTG ACAAAGTATT TGATACAGAC ACAGGCGCAG ACCTTACCAT TATGGAAGAA
GGTACAGAGC TTATTAACCG AATTAAAAAC GGTGGTAAGT TACCGCTAAT AACCTCATGT
TCACCAGGCT GGATAAAGTT CTGTGAGCAC TACTTTCCAG AATTTTTAGA CAACTTATCA
ACTTGCAAAT CACCACATGA GATGTTTGGT GCTATTTTAA AGACATACTT TGCACAGAAG
ATGGGAATTG ACCCTGCGAA TATGTTTGTT GTATCTGTCA TGCCATGTAC CGCTAAGAAA
TTCGAAGCTC AAAGAGAAGA ACTTGCTGCA AGTGGATATC CAGATGTTGA TGCAGTATTG
ACGACAAGAG AGCTCGCAAG AATGATAAAA GAAGCGGGAA TTGACTTTGT GAACTTGCCA
GATAGCCACT TTGACGACCC AATGGGAGAT GCAACAGGTG CAGGTGTCAT CTTTGGAACA
ACAGGCGGTG TAATGGAAGC AGCACTGCGA ACTGTATATG AAGTGCTAAC AGGAAAAACA
CTTGAAAATG TCGAAATTAC TCAAGTTCGT GGCCTTGAAG GAATAAGAGA GGCTGAGATT
GATGTTGGCA CTATGAAGAT TAAAGCAGCT GTTGCACATG GTCTTGCAAA CGCTAAAAAA
CTTCTTGAGA TGGTCAAAAA CGGAGAAAAA GAGTATCATT TTATAGAAAT TATGGCATGT
CCCGGTGGCT GCATAATGGG TGGTGGACAG CCAATTGTTC CTGCAAAGGT AAAAGAAAAA
GTAGATGTTG CAAAACTCAG AGCAAGCGCA ATATACGACG AAGATAGGTC CCTGCCAATA
AGAAAGTCTC ATGAAAACCC TGCTGTAAAA AGATTATATG AAGAGTTTTT AGACCATCCA
AATAGTGAAA AAGCTCATCA TATTCTGCAT ACACACTATA AAAAAAGACC ACTATACTGA
|
|---|
| Protein sequence | MEMVNITIDG KKIQVPKDYT VLQAAREAGV EIPTLCYLKG INEIGACRMC VVEVKGARSL
QAACVYPVSE GMEVITNSER VRRARKVNLE LILSNHDRSC LTCVRSGNCE LQKLAEDLNV
KQIRYEGENI RRPLDDFSPS VVRDPNKCIL CKRCINVCRN VQEVGVINAN YRGFRTVIST
AFDRSLNDVA CTMCGQCIQA CPVGALREKD STDIVWKALA DKNKYVVVQA APAVRVALGE
EFGLPIGTRV TGKMVTALKM LGFDKVFDTD TGADLTIMEE GTELINRIKN GGKLPLITSC
SPGWIKFCEH YFPEFLDNLS TCKSPHEMFG AILKTYFAQK MGIDPANMFV VSVMPCTAKK
FEAQREELAA SGYPDVDAVL TTRELARMIK EAGIDFVNLP DSHFDDPMGD ATGAGVIFGT
TGGVMEAALR TVYEVLTGKT LENVEITQVR GLEGIREAEI DVGTMKIKAA VAHGLANAKK
LLEMVKNGEK EYHFIEIMAC PGGCIMGGGQ PIVPAKVKEK VDVAKLRASA IYDEDRSLPI
RKSHENPAVK RLYEEFLDHP NSEKAHHILH THYKKRPLY
|
|---|
| |