Gene Athe_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1289 
Symbol 
ID7408870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1381584 
End bp1382393 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content36% 
IMG OID643715654 
Producthemolysin A 
Protein accessionYP_002573162 
Protein GI222529280 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.403831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAGA GGGCTGATTT ACTTCTTGTT GAAAAAGGTC TAGTAGAATC ACGTGAAAAG 
GCAAGAGCGT TAATTTTGAG TGGTAACGTA TATGTGAATA ATCAAAAAAT AGAAAAAGCA
GGGGAAATGA TAGATGAAAG GAGCCAGATA ATAATTAAAG AGCCACTAAA ATATGTCAGT
AGAGGCGGTC TTAAACTTGA AAAGGCTTTA GATTTTTTTA AAATTTCGGT TGAAGGCAAA
ATAGCCCTTG ACATTGGTGC TTCAACAGGA GGGTTTACAG ACTGTTTGCT CCAACATGGC
GCTAAAAAGG TTTACTGTGT TGATGTTGGA TATGGTCAGC TTGCATGGAA GTTAAGAGAG
GACCCGAGAG TAGTAAATTT TGAAAAGACT AATTTTAGGT ACTTTGACAG AAAAAGTATT
CAGGATAAAA TTGATATTAT AGTATGCGAT GTCTCCTTTA TTTCTTTGAA CCTAATTGCA
GAGAAGGTAA AAGAGTTCAT GGAGAACAGC ACAGAAGGTA TTTTACTAAT AAAACCCCAG
TTTGAAGCAG GAAGAAAGGA GGTTGGAAAA AGAGGAGTTG TAAAGTCTAA GGAAACTCAT
AAAAGTGTGA TCAAAAAGGT AATTGATCAC TATTTTTCTC TCGGAATCTC AATCAAGGGT
TTGACATATT CGCCAATCAC AGGGCCAGAG GGGAATATAG AGTATCTTCT CTATATTAAA
ATGGAAGATG AGACCGAAAA TAACATAGTT GACATTACGA TAGAAGAAAT TGTCAACCAA
GCCTTTGAAA CATTTGGTCA GAAAAAGTAA
 
Protein sequence
MKKRADLLLV EKGLVESREK ARALILSGNV YVNNQKIEKA GEMIDERSQI IIKEPLKYVS 
RGGLKLEKAL DFFKISVEGK IALDIGASTG GFTDCLLQHG AKKVYCVDVG YGQLAWKLRE
DPRVVNFEKT NFRYFDRKSI QDKIDIIVCD VSFISLNLIA EKVKEFMENS TEGILLIKPQ
FEAGRKEVGK RGVVKSKETH KSVIKKVIDH YFSLGISIKG LTYSPITGPE GNIEYLLYIK
MEDETENNIV DITIEEIVNQ AFETFGQKK