| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1288 |
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| Symbol | |
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| ID | 7408869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerocellum thermophilum DSM 6725 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012034 |
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| Strand | + |
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| Start bp | 1379737 |
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| End bp | 1381587 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643715653 |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_002573161 |
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| Protein GI | 222529279 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0593022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGTATAT TAGAAAAAGT AAACTATCCT GAAGATATAA AAAGATTGAG TATATCTGAA
CTTTATGAAC TTGCTGAAGA AATAAGAGAA TTTCTGTTGT ATAACATCGC CAATACAGGT
GGACACTTGG CGGCAAATTT GGGAGTTGTT GAGCTAACTC TTGCTCTGTT AAAAGTATTT
GATCCACCAA AAGATAAAAT TGTGTGGGAT GTAGGACATC AATGTTATGT TTATAAGATT
TTGACAGGAC GAAAGCAAAA ATTTAACACT TTAAGGAAAT TTGGTGGTTT GAGCGGTTTT
CCAAAATCAA AAGAAAGCAT TTATGACTCG TTTGATACTG GACACAGTTC TACTTCTATT
TCTGTTGCAT TGGGATTTGC AGTTGCACGT GATCTTAAAA ACGAAGACTA CGATGTGATT
GCGGTAATAG GAGATGGAGC TTTAACTGGA GGACTTGCAT ATGAAGGGCT CAATAATGCA
GGCAGATATA ATGGTAAACT TCTTGTTATT TTGAATGACA ATGACATGTC AATCTCCAAA
AATGTTGGTG CGATTGCAAA ATATCTATCA AAGGTACGAA CAAAACCACG TTATTTTAAA
TTGAAAAAGG CTGCTGATAG TTTGGTAGAA GGAATTCCGA TTGTTGGTAA AAACTTAAGC
AAGTTTGTGA GAAAAGTAAA AGGAAGTTTA AAATATTTTT TCTTTCCTGG GACTTTGTTT
GAAGCTCTTG GATTTGAATA TTATGGACCT ATTGACGGTC ATGATATAGA AAGACTTTGT
GAGGTATTCA AAAGTGTTAA AGATTTTGAA AGACCTGTTT TGGTTCATGT TGTTACACAA
AAAGGTAAAG GATATGAACA TGCTGAAAGA TTTCCAGAAA AATTCCATGG TGTTCCACCA
TTTGACATAG AAACAGGAAA TCACTTATCT GACAATACTT CAAAGACATT TTCTGAGGTT
TTAGGTGATA AGCTTTGCGA GCTTGCCAAG CGCAATCCAA AGATATTAGC AATTACCGCT
GCAATGCCAG ATGGTACTGG TCTTAGCAGG TTTGCAAAGA TGTATCCTCA AAGGTTTTTT
GACGTTGGAA TAGCAGAGGA ACATGCGGTC ACTTTTGCAG GTGCTCTTGC TAAAGAGGGA
TTTAAACCAT TTGTGGCTAT ATATTCAACC TTCCTGCAAA GAGCTTTTGA CCAGATTATT
CATGATGTGT GTCTTCAAAA TTTGAATGTG GTCTTCTGTG TAGACCGAGC AGGTCTTGTA
GGCGAGGATG GAGAAACACA CCATGGAAGT TTTGATATAT CGTATTTGAG CCTAATTCCA
AACTTGACAT TGATGGTGCC AAAGGATACA AAAGAATTTG AAATGATGTT GGAATTTGCA
GCTTTCTACC AGGACGGCCC TATTGCAATA AGGTATCCAC GCGGGAGCTG TAAGCAAGTT
GGTCTTTACG ATGAAATTAA ACTTTCTGAA CCAGAGATAT TAAAAGAAGG AGTGAATCTG
GCTATATTTT CTATTGGAAG ACATGTTTCA ATGTTGTATG ATATTATTAG CAAAAACAAG
TTGGATGCAA CACTGGTAAA TGTAAGATTT ATAAAACCTT TGAATACCAA GATTATAAAA
AGAATAGTAA ATACACATAA AAAGATTTTA ATTGTAGAGG ACAACAGTAT TATCGGTGGA
CTTGGTGAAA AAATAAAAAG TATTATAGCT GAAGAAAAAT CAGTAGAGAT TAAGCACATA
GCTATACCTG ATAGATTTAT TCCTCATGGT TCAATTTTTC AGCTTTATTC TATGCTCGGG
ATGGATAGAG AAAACTTAAC AAAAATTGTT ATGGAGCTGA TAGAGAGTTG A
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| Protein sequence | MGILEKVNYP EDIKRLSISE LYELAEEIRE FLLYNIANTG GHLAANLGVV ELTLALLKVF
DPPKDKIVWD VGHQCYVYKI LTGRKQKFNT LRKFGGLSGF PKSKESIYDS FDTGHSSTSI
SVALGFAVAR DLKNEDYDVI AVIGDGALTG GLAYEGLNNA GRYNGKLLVI LNDNDMSISK
NVGAIAKYLS KVRTKPRYFK LKKAADSLVE GIPIVGKNLS KFVRKVKGSL KYFFFPGTLF
EALGFEYYGP IDGHDIERLC EVFKSVKDFE RPVLVHVVTQ KGKGYEHAER FPEKFHGVPP
FDIETGNHLS DNTSKTFSEV LGDKLCELAK RNPKILAITA AMPDGTGLSR FAKMYPQRFF
DVGIAEEHAV TFAGALAKEG FKPFVAIYST FLQRAFDQII HDVCLQNLNV VFCVDRAGLV
GEDGETHHGS FDISYLSLIP NLTLMVPKDT KEFEMMLEFA AFYQDGPIAI RYPRGSCKQV
GLYDEIKLSE PEILKEGVNL AIFSIGRHVS MLYDIISKNK LDATLVNVRF IKPLNTKIIK
RIVNTHKKIL IVEDNSIIGG LGEKIKSIIA EEKSVEIKHI AIPDRFIPHG SIFQLYSMLG
MDRENLTKIV MELIES
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