| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1257 |
|---|
| Symbol | |
|---|
| ID | 7408177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 1348577 |
|---|
| End bp | 1349236 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643715622 |
|---|
| Product | competence protein ComEA helix-hairpin-helix repeat protein |
|---|
| Protein accession | YP_002573130 |
|---|
| Protein GI | 222529248 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
|---|
| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000791854 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTAT TTACAAAAAG AGAAAAGGTT ATGATTGTGA TTATTGGTGT ACTTCTTATG
CTCAATGTAT ACCAGTATTT TACGCACAAT GGTCTTTCGG ACAAAAGCAC TGGGGAAGTG
GTTACCATTG AGTCGCAAGA AGGCGACAAT GACATTGCGA ACAATGAAGG TAAAGAAACA
GCTGAGACAA ATATTCAAGA TTTTCAGCAA AAATGCATTG TTTATGTGTG CGGAAACGTA
AAAAATCCAG GAGTTTATGA GCTTTTACCA GGCAGCAGAA TAAACGATGC CTTGGTTTTG
GCGGGTGGAG CTCTACCTGG AAGTGACCTG AATTCAATTA ATCTTGCTGA GAAAATTTCT
GATGGGCAAA AGATTTATAT TCCAAAGATA GGCGAAGTGC AGTCGCAAAG TAGTTTGTCT
TCTTCAACGG GTGGAACAAA ACAAGAAACT ATTTCTGAAG ATGAAAGAAA AATTAACATA
AATACTGCTA CCAAAGAAGA GTTGAAAACT CTTAATAGAA TTGGTGATAA ACTTGCTGAA
AGGATAATAG AATATAGACA AAAGCATGGA CCATTTAAAA GTATTGAAGA GATAAAAAAC
GTAAACGGTA TTGGGGAGAA GATATTCGAG AGTATTAAGG ATTCTATCAC AGTGCAATAA
|
|---|
| Protein sequence | MPVFTKREKV MIVIIGVLLM LNVYQYFTHN GLSDKSTGEV VTIESQEGDN DIANNEGKET
AETNIQDFQQ KCIVYVCGNV KNPGVYELLP GSRINDALVL AGGALPGSDL NSINLAEKIS
DGQKIYIPKI GEVQSQSSLS SSTGGTKQET ISEDERKINI NTATKEELKT LNRIGDKLAE
RIIEYRQKHG PFKSIEEIKN VNGIGEKIFE SIKDSITVQ
|
|---|
| |