| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1054 |
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| Symbol | |
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| ID | 7409611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerocellum thermophilum DSM 6725 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012034 |
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| Strand | + |
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| Start bp | 1148507 |
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| End bp | 1149379 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643715420 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002572928 |
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| Protein GI | 222529046 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000156302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGAG TTTTGCTTGT TGACAAACCA GTAGGAATTA CCTCACATGA TGTTGTTGAA
TTTGTCAGAA AAGTGTTCAA CGTGAAAGCT GGGCATGCAG GAACGCTCGA CCCGTTTGCA
ACAGGGCTTT TGGTCATTTT GCTGGGGGAG GCTACAAAGC TTTCTTCTTT CTTTACAAGC
CAGGAAAAAA CATATATAGC AACAATGCAG TTTGGCATAA GGACTGACAC GCTTGATATA
ACTGGTAAAA TCAAAGAAAA GAATAGTGTA ATTGTTGAAG AAAAGGAGAT AGAAGAATGC
TTTAAAATTT TAAAAGGAGA AATCGAACTT AAGGTTCCAA TTTTTTCTGC AAAGAAACTC
AATGGCAGAA AACTCTATGA GTATGCGCGA AAAGGAATAA ATATTGAAAT TCCAAAGGTG
AAGAGTATCA TATATAATAT AGAGATAATC AACTTTTCAT ATCCGTATCT TGAATTTAAA
GTTCAGTGCA GCCATGGAAC ATATATAAGA AGTTTGGCAG AAAAGATTGC AGAAAATCTT
TCTACTGTGG GTCTGCTTTC TGAGCTAAGA AGGATAAGAA GCGGTTTTTT TGATTTGAAA
GATGCAGTTA CTTTGAGCGA TATCAGGGCA GAAAGTATAA TTCCTGTATG TAGGCTATTT
AAAAATGAGA TAAAAGTAGG CAGAAAAACA TATAAGAAGA TTTTAAATGG GAATCCACTC
GTAAACCAGG ACATAGAAGA TATTATAGAT ATTGACACTG TATTTGCAGA CTTTTATAAA
ATTTGGGTTG ATAAGGTTGT CTTTATATAC AAACGAGAAA ATGATGTGTT TAAATATATT
TTAAAGGTGG AAACTACAGA TGAATGTTTA TGA
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| Protein sequence | MNGVLLVDKP VGITSHDVVE FVRKVFNVKA GHAGTLDPFA TGLLVILLGE ATKLSSFFTS
QEKTYIATMQ FGIRTDTLDI TGKIKEKNSV IVEEKEIEEC FKILKGEIEL KVPIFSAKKL
NGRKLYEYAR KGINIEIPKV KSIIYNIEII NFSYPYLEFK VQCSHGTYIR SLAEKIAENL
STVGLLSELR RIRSGFFDLK DAVTLSDIRA ESIIPVCRLF KNEIKVGRKT YKKILNGNPL
VNQDIEDIID IDTVFADFYK IWVDKVVFIY KRENDVFKYI LKVETTDECL
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