Gene Athe_0970 details

Gene Information

• Locus tag: Athe_0970
• Symbol: rimM
• ID: 7407871
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerocellum thermophilum DSM 6725
• Kingdom: Bacteria
• Replicon accession: NC_012034
• Strand: +
• Start bp: 1073547
• End bp: 1074056
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 643715337
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_002572846
• Protein GI: 222528964
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000015249
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAAGT ACCTCCAAGT TGGCAAGATT GTAAATACTT TTGGACTCAA AGGTGAAGTT 
AAGGTAATAC CTCTTACAGA TGAGGTTGAC AGGTTTTCTG AGCTTGAATA TGTTCTTTTG 
GAAGACAACC TTTCAACAAA GCTCACAATT GAAAGATATA GAGTAAAAGA TAATATTGTG 
ATAATCAAGT TCAAAGAAAT TTCCAGCATA GATGAAGCAC AAAAGCTGAA AAACAGGTAT 
ATAGTGATAG AAAGAGAAAG AGCCAAAAAA CTGCCAAAGG ACACTTATTT TATATGTGAT 
ATTATTGGGC TTGAAGTGTA TGATTTAGAT GGCAGAAAAC TGGGTAGAAT AAAGGATGTT 
TTAAAAACCG GAAGCAACGA TGTTTACATT TGCGACAGCT ATATAGGAAA GAAAGACATA 
CTGATTCCTG CCTTGAAAGA GATTGTAAAA GAGGTTAATA TCGAAGAGGG ATATATGAAA 
ATAAAGGTTG TTGAAGGGTT GTTGGATTAA 

 

Protein sequence

MYKYLQVGKI VNTFGLKGEV KVIPLTDEVD RFSELEYVLL EDNLSTKLTI ERYRVKDNIV 
IIKFKEISSI DEAQKLKNRY IVIERERAKK LPKDTYFICD IIGLEVYDLD GRKLGRIKDV 
LKTGSNDVYI CDSYIGKKDI LIPALKEIVK EVNIEEGYMK IKVVEGLLD