| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_0736 |
|---|
| Symbol | |
|---|
| ID | 7408430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 827004 |
|---|
| End bp | 827663 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643715108 |
|---|
| Product | sporulation sigma factor SigK |
|---|
| Protein accession | YP_002572624 |
|---|
| Protein GI | 222528742 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02846] RNA polymerase sigma-K factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000259555 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTACA TCGAAAATCA AAGCTCATTC CCCCAACCGA TGTCTCCTGA AGAAGAAGAA
ATGTATCTGA ACAAGATGAG GGAAGGCTGC AAAGAGGCGC GAAATATTCT CATTGAAAAA
AATCTGCGTC TTGTTGCGCA TATAGCAAAA AAATACACAT TTTCATTCCC AAATTTAACA
GATGATATCA TTTCTGTTGG GACAATTGGC CTTATAAAAG CAATTGAGAC TTATTCTTCA
GCTAAGTGCA CAAAGCTTTC TACATATGCA GCAAAATGTA TCGAGAACGA GATACTGATG
TATCTTAGGC AGAACAAAAA ATTTTTGTCT CAGCTTTCAC TTGAAAATCC AATTGGTAGT
GACAAAGACG GAAATGAGAT AACGCTCATG GACGTTATGC AAAATGACCA GGAAGATATA
GACGAGCAGG TTGATTTAAA AATCCAGATA AAAAATCTTT TGAAAAAGCT TGACAAAATT
TTAAAAGGTC GCGAAAAAAA GATCATTGAG CTCAGATACG GGCTTAAAAA TGGCATAGAA
AGAACACAGA TGGAGGTTGC AAACTTGCTT GGTATTTCCC GCTCATACGT TTCACGAATA
GAAAAAAAGG CACTTCAAAA GCTCTATGGG GAACTTCAAA AGTTATGTGA TGGTATATAA
|
|---|
| Protein sequence | MFYIENQSSF PQPMSPEEEE MYLNKMREGC KEARNILIEK NLRLVAHIAK KYTFSFPNLT
DDIISVGTIG LIKAIETYSS AKCTKLSTYA AKCIENEILM YLRQNKKFLS QLSLENPIGS
DKDGNEITLM DVMQNDQEDI DEQVDLKIQI KNLLKKLDKI LKGREKKIIE LRYGLKNGIE
RTQMEVANLL GISRSYVSRI EKKALQKLYG ELQKLCDGI
|
|---|
| |