| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_0505 |
|---|
| Symbol | |
|---|
| ID | 7408629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 574668 |
|---|
| End bp | 576191 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643714887 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_002572404 |
|---|
| Protein GI | 222528522 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAA GAGTTATTAG AATATTTGAT ACCACGCTCA GAGACGGTGA GCAAACACCA
GGTGTGTCGC TCAACGTCAA TGAAAAACTT GAGATTGCAA AACAGCTTGA AAAACTCAAA
GTTGATGTGA TAGAAGCAGG ATTTGCAATT GCCTCTCCTG GGGATTTTGA GGCAATAAAA
GTAATATCTG AGAATATAAA GGATGCAGTA ATAGTCTCTT TGGCAAGAGC AATTGAAAAA
GACATAGATA GGGCGTATGA GGCGCTCAAA AAGGCTTCAT CCCCAAGAAT TCATACATTC
ATTGCAACAA GTGATATTCA TATGAAATAC AAGCTCAAGA TGACAGAAGA TGAGGTACTT
GAGCGAGCAG TTGCTATGGT AAAATATGCA AAAAAATATG TGTCTGATGT AGAGTTTTCA
TGTGAGGATG CAACACGTTC AAGAATTGAA TTTTTAATAA AGGTGTTTGA CGCTGTAATA
AAAGCCGGTG CAACAGTTAT AAACATACCA GACACGGTAG GCTACACAAC ACCTGAAGAG
ATGAAAAGAA TTATTCGAGC AATAAAAGAA AACATTCCTG ACATTGACAA GGTTCAAATT
TCAGTTCATT GCCACAACGA CTTAGGTCTT GCTGTTGCAA ACTCATTGGC TGCTGTTGAA
GAAGGGGTTC ATCAGGTTGA ATGTACAATA AATGGTCTTG GTGAGAGGGC TGGGAATGCT
GCCTTAGAAG AAATTGTAAT GGCTCTCAAA ACCCGAAAAG ACTTTTATGA TGTTGATGTT
TTGATAGATA CAACCCAGAT TTATCGAACA AGCAAGCTTG TGTCTTCTCT TACAGGCGTA
TTTGTTCAGC CAAACAAAGC AATAGTTGGT GCAAATGCAT TTGCGCACGA GTCTGGTATA
CATCAGCATG GAGTATTGTC AGAACGAACA ACATATGAGA TTATTGACCC TGTGTCAATT
GGTCTTCCGA AAAACAGGAT GGTTTTGGGC AAGCACTCTG GTCGTCATGC GTTTGAAGAA
AGGCTCAAAG AGCTTGGATA CACAGACCTC ACAAGAGAAG AGATTGACGC TGCATTTGAA
AAGTTTAAAG TTTTGGCAGA CAAAAAGAAG GTTGTACTTG ACAAAGACAT TGAGGCACTT
TTAGAACAAA AGTCACTCAA TATTCCAGAG ACATATGAGC TTGTAAGGTT CCAGATAATA
AGCGGAAATG GTCTTATATC AACTGCATCT GTAAGGATAA AATCGGGTGA GGAAGAGTTT
GAAGAGGCGG CGACAGGTGA TGGTCCTGTT GATGCAATCT TCAAGGCAAT TGACAGAATT
ACAGGTCTTC AGGTTGAACT TGATGATTAT AGTATAAAGG CTGTCACCCA GGGCAAGGAT
GCTCTTGGCG AGGTAACAGT CAGAATTAAG AAGGATGGCA AAGCGTTTTT GGGAAGAGGC
TTATCTACAG ATATTTTAGA AGCAAGCGCA AAAGCGTATG TAAATGCTAT AAATAAGATG
CTGTATAAAA TTTCAGAGGA GTAA
|
|---|
| Protein sequence | MGKRVIRIFD TTLRDGEQTP GVSLNVNEKL EIAKQLEKLK VDVIEAGFAI ASPGDFEAIK
VISENIKDAV IVSLARAIEK DIDRAYEALK KASSPRIHTF IATSDIHMKY KLKMTEDEVL
ERAVAMVKYA KKYVSDVEFS CEDATRSRIE FLIKVFDAVI KAGATVINIP DTVGYTTPEE
MKRIIRAIKE NIPDIDKVQI SVHCHNDLGL AVANSLAAVE EGVHQVECTI NGLGERAGNA
ALEEIVMALK TRKDFYDVDV LIDTTQIYRT SKLVSSLTGV FVQPNKAIVG ANAFAHESGI
HQHGVLSERT TYEIIDPVSI GLPKNRMVLG KHSGRHAFEE RLKELGYTDL TREEIDAAFE
KFKVLADKKK VVLDKDIEAL LEQKSLNIPE TYELVRFQII SGNGLISTAS VRIKSGEEEF
EEAATGDGPV DAIFKAIDRI TGLQVELDDY SIKAVTQGKD ALGEVTVRIK KDGKAFLGRG
LSTDILEASA KAYVNAINKM LYKISEE
|
|---|
| |