| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_0462 |
|---|
| Symbol | |
|---|
| ID | 7407540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 528197 |
|---|
| End bp | 529543 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643714850 |
|---|
| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| Protein accession | YP_002572367 |
|---|
| Protein GI | 222528485 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00445069 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAT ATATTAAAAG CTATCACAAG CTGAGCAAAT TTTTTGTTGT TCTTATGGAC
ATTTTACTTG TACATGCAGG TTATATAATT GCCTATATTA TAAAATTCAA CTTTACATTT
CCAGAGAAAA ATTTCATGCC TTATTATACA TTAATTCCTC AAATAACTCT TTTTGCTCTT
GTTCTTTTAA ATATTTATGG ACTTTATACT ATTACCATGA AAACCATTAG CGAAATAGCA
TTTTCGCTGG GTCTGGCTCT AATGCTTCTA CAATTTTTAA CAGTTGTATC AACATTTTTC
TACAGACACT TTGCTTTCCC ACGCAGTATA TTTATAATTG CCTTTTTTGT ACAGTTTTTA
TTGCTTTTGG GATGGAGAGG ACTTGTCCTA TATGTTTTCA AAAGAGTTCA AGGTGTCAAG
CATGTACTTG TGATTGGAGA GATGTCAAAG GCGCAGGAGT TTGCTCAAAA GCTTCAAAAT
ATTTCGAAAG GTTGGATAGA TGTAAAGTAT GTTCTTGAGC CAAAAGCTAT AGAAGAATTG
ATACTATATA TAAAACTTGT TGATACAATT TATATTTATT CAAAAATGGA TGAAAACTTA
AAAAGTGAGA TTGTAAGAAA GGCGATAGAA TTCAAAAAAC ATATTTTCAT AGCACCAGAT
TTTAGAGATA TATTGGTATC ACGTGCGAGG GTGATTCAGT TTGATGATGT TGCAACACTT
TCAATTGAAC AGCCAGAACT TACTTCCGAG CAAAAGCTTA TAAAAAGATT TTGTGACATT
CTTCTTGCAT CAGTTGCGCT GGTTATTTCT TTTCCTATAA TGATCTTGAT TGCAATTGCC
ATAAAAATTG ACTCAGAGGG GCCAGTAATT TACAAGCAAA AAAGGGTCAC AGAAGGAGAG
AGAGAGTTTT ATGTTTTAAA GTTCAGAACA ATGGTAAAAG ATGCAGAAAA GATGACAGGT
CCTGTTCTGG CAACCGAAAA CGACCCCAGA ATAACAAGGG TTGGAAGGTT TTTGCGCGCA
ACAAGGCTTG ATGAGCTTCC GCAGCTGATA AATATTTTAA AAGGTGAAAT GAGTTTTATA
GGACCAAGAC CAGAGCGTCC TTATTTTGTT GAGCAGTTTA AAAAACTCTA TCCTGAGTAT
TCGCTTCGTC ATAATGTAAA GGCAGGGCTC ACAGGACTTG CCCAGGTTTA TGGCAAATAT
GCAACAAGCC CTGAAGACAA GCTCAGGCTT GATTTGATAT ATATAAAGAA TTACTCTGTA
TTTTTAGACA TCAAAATTTT ACTGTTGACC TTAAAAACAA TTTTTACCAA AGAGGCAGCT
GAGGGGGTAA AAAACCAAAA AGGATAG
|
|---|
| Protein sequence | MKSYIKSYHK LSKFFVVLMD ILLVHAGYII AYIIKFNFTF PEKNFMPYYT LIPQITLFAL
VLLNIYGLYT ITMKTISEIA FSLGLALMLL QFLTVVSTFF YRHFAFPRSI FIIAFFVQFL
LLLGWRGLVL YVFKRVQGVK HVLVIGEMSK AQEFAQKLQN ISKGWIDVKY VLEPKAIEEL
ILYIKLVDTI YIYSKMDENL KSEIVRKAIE FKKHIFIAPD FRDILVSRAR VIQFDDVATL
SIEQPELTSE QKLIKRFCDI LLASVALVIS FPIMILIAIA IKIDSEGPVI YKQKRVTEGE
REFYVLKFRT MVKDAEKMTG PVLATENDPR ITRVGRFLRA TRLDELPQLI NILKGEMSFI
GPRPERPYFV EQFKKLYPEY SLRHNVKAGL TGLAQVYGKY ATSPEDKLRL DLIYIKNYSV
FLDIKILLLT LKTIFTKEAA EGVKNQKG
|
|---|
| |