Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0346 |
Symbol | |
ID | 7409276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 395064 |
End bp | 401171 |
Gene Length | 6108 bp |
Protein Length | 2035 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643714732 |
Product | YD repeat-containing protein |
Protein accession | YP_002572255 |
Protein GI | 222528373 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGG AGGAATATAA AAATTATAAA AAAAGTCTTG CTCCACAAGT GTCGACAAAG TCAATCTCGC GCTTAACTAC TTTTTCCACA AACTCAGCTT CTCTGTCAGC GTCAGTTCAA AATGCATCAC AGCTTGTTGG AAATGATTTT ATAGAGTATT TTTTACGTGG AGAAAATAAT GATTTAAGGG GCCGTTTTAC AATAGGAGCA AGAAAAGGTG ATCCTTCAAA TCCAAATGAT GATGGTAAAA TAATGCTTTA TGGGCATCCC GATGCATGGT CAAGCTATAC AACAATCAAT ATTGATGGTT CATACTTTAT TTTCAATCCT TCATCCATTT CATACAGTGG AACCACTTCA TTGTGCCAGC AAGTAGCAAA TGATGTATAT ATTGTTCAAG AGCTTTCTAT TGTCAAAAGT GCCACAACTC AAAGAGAAGA TACTGTTCAG ATAAAGTATA AAATAAAAAA TAGTTCAACA GAAGCTAAAA ATATTGGTCT TAGGATAATG CTTGACACAA TGCTTGGAAG TAACGATGGA GCACCATTTA GAGTACCAGG GCTTGGAGCA GTTACTAACG AGATTGAACT TTCTGGTGAT AATATACCCG AATATTATCA AGCCTTTGAT ACACTTACAA ATCCCACTAT AATAACTCAA GGGATATTTT ATACAGATAA AGGAAATAGA CCAGATAGAG TTCAATTTGC TCACTGGTCA AATTTGTATC GTACTCCATG GAATTACACA GTTAACCCAA ATGTGAGGTT TTCTAATGGT ACTTCATATG GTGGTGACAG TGCTGTTGCA ATATATTGGG AAAATGAAAT TCTTCTTCCT AATGAAGAAA AAGAGTTTGT AACATATTAT GGTATAGGCG AATTTACACA GGAACTGAGA CCACCTTTAG CGGTAAGTCT AACATCTGTA AGTGAAATTC AAGCAAATGA AAATGATTAT TATCCAAATC CTTTTACTGT AACAGCTTAT ATAATGAACA ATTCAAAAGT CCAGGTAAAC AATGTAAAAG CAAAGATTGT ATTACCTGAC GGACTTGATA TTGAAGAAGA AGCTGAAAAA ACTATTGACA GTTTAAAGCC AGGAGAAGAA CGTTTAGTTT CGTGGAAGGT ATTCGTTGAA CCGTTTCCTG AAGAAACCAC GTTGACTTAT TCTGTTGCAG TTGTGGCAGA TAATGTTGAG GGTAAAGTTT TATCAAGAAC AATAAAAATA CCCTCCCATC CAGCTGGCGA CCAGTTTTTA TATCAAACTG GAATTGAGAC CATTGAGAAT GGCACAAGCT GTTTAGTAGG TGAGCCTGTA AATCCAGCGG TGGGTAATTT TGTAACAAGT TCTGATGATA TTTCTATTGA GGGTAGTAAC AAGATAGTAT TTAGCAGATT TTATAATTCT ATTGATTCAT ACAAGGGTAT ATTTGGCAAT AATTGGAGAT ACTCATTTGA TTTTAAACTT AAAAAAGTGG GTGAAAAACT AAGAGTATTC TTTAGTGATG GGCATGCAGA AGATTTTGTT TTTAATCAAG ATATTAGCAA ATATATATCA ATTTTTGATA ACAAAAAATT TATCACTAAA AACCAGAACG ATTATATACT TGAACTCAAT GGAGAGGTCA AATTCTATTT TAATTTGGAC GGACAATTAA TAGCAATAGA AGATGAAAAT AGCAATAAAA CAACTCTGGT TTATGAGGAT GGTAGACTTG TAAAAATTGA ATCTTTGATT GGATATTTAA CCTTCCATTA CAATACAGAT GGATATGTGA CAAAAGTTAC TGATAACAAT GGGCGTTTTG TTGAATATGG CTATGATAGG GACAGGTTAA TTTGGTTTGC AGATGTTGAG GGGAACAAAT ACAGATATGA ATATGACGAA AAAGGAAGAC TTACAAAAAT AATAAATCCG CTTGGAGTTT CAGAAGTAGT AAACGTATAT GATGAAAAAG GAAGAGTAAT TAGTCAGCAA ACAGCAGACG GTAGCTTGCA CACATTTATG TATGATGATG TTGCTCACAC TACCACATAT ATTCAGCCAA ATGGAGCTAA AATTGTTTAT AAAAAAGATG GCAAATACAG GATATTCGAA CAGGAATTTG AAGATGGAAA AGTTCAGTAT GTCTTTGACG ACAACAATCA GATAATTGGT TATATTGACA AGAATAACAA CAGTTACAGG TACGAATATG ATGAAAAAGG CAACCTAATA AAAGAAATTA ATCCTCTTGG CTTTGTTACA CAATTTGAAT ATGACAGTAG AGACAATTTA ATAAAAATTA AAAATCCCGA TGGAACTGCG ATTACTTTTG AGTATGATGA TAAAGGCAAC GTGATATTAA CAAGAGATGA AGTTGGAAGA GAAACCAAGG TAGAATATAA CGAAAAGGGT CTTCCTAAAA GGGTTATTCT TCCAAATGGA GCAGTACAGG AGTTAGAATA TGACGAGAAA GGAAACGTAA CAAAAATAAA AGATCCATTG GGAAGTATAA CCACTTATGA GTATGACACT TTCAACAGAT TAATTGGGAT GATTAAGCCC GAGGGTAATA AAACAGCATT TTCGTGGACA AAAGCAGGTT ATATATCCTC AATAAAGTAT CCTGACAATA CGTCTCAAGA ATTTGAATAT GATGCTAAAG GCAATGTGAC AAAAATAATT GACCAGCTTG GAAGACAAAC AATTTACAAG TACAATGAAA TTGGCAAGCT AAGTGAGATA ACAGATGCGG TTGGTAGGGT GACAAAATTT GAATACGATA ATATGTGGAA TTTGAAGAAA ATAATAAAAC CGGATGGCAC TTTTATAGAA TATTCATATG ATAACTTAAA CAGGCTTGTT GCAGTGAAAG ATGAAGAAGG ATTTATTGTG AAGTACGAAT ACGACCCTAA TGGTAATGTG ACCAGAGTAG TAAGTAGCAG CGGGAAAGAG ACCAAGTATG TTTATGATGC TCTTAACAGA GTTATAGAAG AAATTGACGC GAAAGGCAGA AGTACAAAAT TCGAGTATAC CTACGATGGC AAGATAAAGA AAATTATCGA TGCGCAGGGA AATGTAACCG AATATGAGTA CAATCCAGCA GGTGAACTTG TTGCTAAAAA AGATGCACAA GGGAACATTG TAAAATACAG CTATAATGCG CTTGGGCTAA TTAGCACTGA AACTGACGAG GTTGGAGCAA CAACACGCTA TGAATACAAT TTAAAAGGAA ATTTAGTCAA GATAACCTTT GCAGACGGTT CAACAAACAG ATTTGAATAT GATAGAAATG GTAATTTGAA GAAATATATT GATGCCAATG GTCAGGTAAC AGAGTATTAC TATGATAACT GTGACAGATT AGTCATGACA AAAGATGCTC TTGGCAATAC GAAGAGATAT GAGTATACGC CAACAGGAAA ACTGAGCGCA ATTATTGATG CAAAGGGTAA CAAGACCACA TTTATATATG ATGCTGTTGA TAGACTTGTA GAGGTAATTT CGCCTGATGG TGCGCGGGAA ATATTTGTTT ATGATTCAAA TGATAACGTA ATAGAAATTC ACAAATTTAT GGGAGTAACA AAAGAGACGA GAGAAAGAAT GAACAAAACA AAGGGTGAAA AGTATTCGGA GCAGTTGAAG GAAATAGTAA TAAAGTACAA ATACAATAAA AGAGGACAGT TGGTATCAGA GCAAGATGCG TTAGGCAATG TAAAAGTTTA TACCTATGAT GCAGATGGAA ATTTAATTGA AAGTGTTGAT AAGAACGGCA ACACTACAAA GTATGAATAT GATGCAGTGA ACAATCTTTC AAAGATAACC TATGCAGATG GGAAAACTGT GGAGTTCAAG TATGATAATT TAGACAGGCT TGTTGAAGTA AATGATTGGT TAGGAAGCAA AAAGTATGAA TATGATGTTT TGGGTAGGGT AACAAAAGTA GTTGATTACA AAGGCAGAGC ATTTGAGTAC AGTTACACCC AAAGAGGAGA AAAAGCTGCA ATAAAATATC CTAACGGTCG ATTGGTGCAG TACGAATATG ACGCTATTGG CAGGTTAATA AAAGTTACAA CTGATGGTAA AGAGACAAAG TACAAGTATG ATGCTAAAGG TAATCTAATA GAAAAGATAT TGCCAAATGG AGTAAGAAGT GTTTATGAAT ATGATGCGGT TTCACAGCTG ACAAGACTTG CAAATTACGG TTCAAAATCT AAGATACTAA GTGAAATACT GTACAAGTAT GATCCAAACG GGAACAAAAT TTATGCAGAA AAGAGGATAA ACGAAAGAGA GATAGGTAAA TTAGCAGGAA TAACTGAAGG AAAAGTATAT TATGAGTATG ATACACGCAA TCAACTTATA AAAGTAAAAA GAGAAAATGG GTTTGAAGAG AGATATTTTT ACGATACACT TGGCAACAGG GTAAGAAAAG AAGAGTATGC GGGAAGGATA CTTGCAAATG TAATTGACTA TAAATACGAC GATGAACAGA GGTTATACGA AATAAAGGCC ACAGGACTTA TTGACTGCAT AAAACTGCCA GAGATCAAAA TGGAATATGA CAGCGAAGGG AACTTAATAA GTATAAAATC TGGCAAGACA GAGATTGTAA GAAATACATT TGATGTTCGG GGAAGGCTTA CAAAGGTAAA TACAATATGG GGAATAGAAA GTTGGTACAC ATACGATTCA TCAGGCAAGA GAGTAAGTAA AATAGTAGAG CTATCAAAAT TTAGCAGAGA TGTACTCAGG AAGTATCTGA ATGAAGAAAG AGTTAGCAGA ATTCAGGAAA GATGTGAAGA GTTAATAAAT AGCAAAAAAT ACAGAGCAGA ATATGAGTAT GTATATGATG AGACAAGTGA AAATGACGAT TTAGTAGCAA TTAATACAAA TTTTGGAGCA GAAGAAGAGT ATATATATGG GAATGGTATA ATAGGAGCAG AAGTAAAAGA GAGAGGAAAA CTATATAGCT ACTATTATCT AACAGACGAC TTATTCAGCC CTCAGATAAT CGTTGATGCG AGAGGCAAAG TAGAAGGATA TAGAGCATAT AGCGAATTTG GGGAAAAAGT AGTAGAGATA GGGAAAATAA GAGGGTTAGA TGTAATAGGA TTTACAGGAT ACAAAGAGGA TAAAGAGAGC GGATATTTAT ATGCAACAGC AAGATATTAT TTACCGCAGG TAGGCAGATT TATAAGCAAG GACAGGATAT TTGGAGAGAT AGCCGAGCTT ACAAGTCAGA ACCCATATGT ATATTGTTTG AACAATCCGC TGATATATGT AGATCCGAGC GGAGAGCTAA GTGTAAGACA GATATTGTTG TTGGCAAAAT CGTTTGCCGA GTCGTTTGTA AAGAAAGCAG CGCAGAAGAT AGTAGAAGCA ATAGGTGGAT TATCGCTAAA GAATTTAGGG TTTTTCAAGG ACATAGTAGT TGGTATAATA AAAGGTGTAA TAAGACTTAG TGACATAGCA AGTGTATTAG CCGAGGGGTA TTTTAAGGAG TATATAGAGC CTGTAGAGAG GTTAATAAAT CTCAGTTCAG AAGTATTTGG AAGAGGAGTT GTATGTGACA GCAAGGTAAT AGAGTATGGA AAATATTTAG GAATAGCCGT TTGCAACATA GTAGAGATAA TAAGTGATTT TGCAACAGGC GGCACAGGAG TATTTGGCAA GGTAGCAGGA AAGTTAGTAT CAGTTCTTGG CAAGGCAGGA AAAAGAGTCA GAGTTAAATT AGGGAAGATA GTAAAGAAAT ATGATGTTTT ATGGGATTTG CCACCATATG GTGGGAAATA CATTAACGGA CGTTATTATA CACAACATGC ACTTGAAAGA ATGGCTCCTG ATATTCCTGA AGTAAGAGAT TTTTTAGTGC AAAAATATCA CAAAATAGCA ACAGAAGAAT GTGGTTATAA ACCAGGAACA AAAGACTATA TTGGTTTTAT GAAGGACAAA GTTAATCCTA GAGGTATACC GCCAATGGTG GTTGAGAATG CGATAAGGCA TGGGAAAAGG CAGCCTGGGA AAAATCCAGG AACGTGGGAT TATATAACTT CTGATGTAAA AGTAGTTGTA AATGAGAGAG GAGATGTTGT AACAGTTCAC AAAATAAGGG GGAAATAG
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Protein sequence | MSEEEYKNYK KSLAPQVSTK SISRLTTFST NSASLSASVQ NASQLVGNDF IEYFLRGENN DLRGRFTIGA RKGDPSNPND DGKIMLYGHP DAWSSYTTIN IDGSYFIFNP SSISYSGTTS LCQQVANDVY IVQELSIVKS ATTQREDTVQ IKYKIKNSST EAKNIGLRIM LDTMLGSNDG APFRVPGLGA VTNEIELSGD NIPEYYQAFD TLTNPTIITQ GIFYTDKGNR PDRVQFAHWS NLYRTPWNYT VNPNVRFSNG TSYGGDSAVA IYWENEILLP NEEKEFVTYY GIGEFTQELR PPLAVSLTSV SEIQANENDY YPNPFTVTAY IMNNSKVQVN NVKAKIVLPD GLDIEEEAEK TIDSLKPGEE RLVSWKVFVE PFPEETTLTY SVAVVADNVE GKVLSRTIKI PSHPAGDQFL YQTGIETIEN GTSCLVGEPV NPAVGNFVTS SDDISIEGSN KIVFSRFYNS IDSYKGIFGN NWRYSFDFKL KKVGEKLRVF FSDGHAEDFV FNQDISKYIS IFDNKKFITK NQNDYILELN GEVKFYFNLD GQLIAIEDEN SNKTTLVYED GRLVKIESLI GYLTFHYNTD GYVTKVTDNN GRFVEYGYDR DRLIWFADVE GNKYRYEYDE KGRLTKIINP LGVSEVVNVY DEKGRVISQQ TADGSLHTFM YDDVAHTTTY IQPNGAKIVY KKDGKYRIFE QEFEDGKVQY VFDDNNQIIG YIDKNNNSYR YEYDEKGNLI KEINPLGFVT QFEYDSRDNL IKIKNPDGTA ITFEYDDKGN VILTRDEVGR ETKVEYNEKG LPKRVILPNG AVQELEYDEK GNVTKIKDPL GSITTYEYDT FNRLIGMIKP EGNKTAFSWT KAGYISSIKY PDNTSQEFEY DAKGNVTKII DQLGRQTIYK YNEIGKLSEI TDAVGRVTKF EYDNMWNLKK IIKPDGTFIE YSYDNLNRLV AVKDEEGFIV KYEYDPNGNV TRVVSSSGKE TKYVYDALNR VIEEIDAKGR STKFEYTYDG KIKKIIDAQG NVTEYEYNPA GELVAKKDAQ GNIVKYSYNA LGLISTETDE VGATTRYEYN LKGNLVKITF ADGSTNRFEY DRNGNLKKYI DANGQVTEYY YDNCDRLVMT KDALGNTKRY EYTPTGKLSA IIDAKGNKTT FIYDAVDRLV EVISPDGARE IFVYDSNDNV IEIHKFMGVT KETRERMNKT KGEKYSEQLK EIVIKYKYNK RGQLVSEQDA LGNVKVYTYD ADGNLIESVD KNGNTTKYEY DAVNNLSKIT YADGKTVEFK YDNLDRLVEV NDWLGSKKYE YDVLGRVTKV VDYKGRAFEY SYTQRGEKAA IKYPNGRLVQ YEYDAIGRLI KVTTDGKETK YKYDAKGNLI EKILPNGVRS VYEYDAVSQL TRLANYGSKS KILSEILYKY DPNGNKIYAE KRINEREIGK LAGITEGKVY YEYDTRNQLI KVKRENGFEE RYFYDTLGNR VRKEEYAGRI LANVIDYKYD DEQRLYEIKA TGLIDCIKLP EIKMEYDSEG NLISIKSGKT EIVRNTFDVR GRLTKVNTIW GIESWYTYDS SGKRVSKIVE LSKFSRDVLR KYLNEERVSR IQERCEELIN SKKYRAEYEY VYDETSENDD LVAINTNFGA EEEYIYGNGI IGAEVKERGK LYSYYYLTDD LFSPQIIVDA RGKVEGYRAY SEFGEKVVEI GKIRGLDVIG FTGYKEDKES GYLYATARYY LPQVGRFISK DRIFGEIAEL TSQNPYVYCL NNPLIYVDPS GELSVRQILL LAKSFAESFV KKAAQKIVEA IGGLSLKNLG FFKDIVVGII KGVIRLSDIA SVLAEGYFKE YIEPVERLIN LSSEVFGRGV VCDSKVIEYG KYLGIAVCNI VEIISDFATG GTGVFGKVAG KLVSVLGKAG KRVRVKLGKI VKKYDVLWDL PPYGGKYING RYYTQHALER MAPDIPEVRD FLVQKYHKIA TEECGYKPGT KDYIGFMKDK VNPRGIPPMV VENAIRHGKR QPGKNPGTWD YITSDVKVVV NERGDVVTVH KIRGK
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