| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_0251 |
|---|
| Symbol | |
|---|
| ID | 7407568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 302429 |
|---|
| End bp | 304633 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643714651 |
|---|
| Product | ABC-type bacteriocin transporter |
|---|
| Protein accession | YP_002572174 |
|---|
| Protein GI | 222528292 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000911417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAAA GATACTATTG TGTAAAGCAG CATGATATAA CAGATTGTGC AGCAGCAAGC
TTAGCAACAA TTTGTTTGCA ATATGGAAAA GAAGTATCGA TAGCCAGAAT AAGGCAGATG
GCAGGTACAG ACAGGTTTGG CACCACAGCA TATGGAGTTG TAAAAGCGGC AGAAAAGCTT
GGATTTGAAG CAAAAGCAGT CAGGGCAGAA GCAAAAGAAG CAATATTTGA AAAAATACCA
CTTCCGTGTA TAGCACATGT ACTGATAGAT GGCAAGCTAT TTCATTATGT TGTAATACAT
GAAATAAGAA AAGAAAGGAT AGTAATAGCA GACCCGGCAA AAGGAATAGT TAAGCTAAAT
CCAGAAGAGT TTTTTAAGAT ATGGACAGGC ATTTTGATAC TTCTTGTACC AAATGAGAGG
TTCAAGAAAG GAAAGCAAGA GGGAGTTTTG AAAAAGTTTT TCAAGTTATT GAGACCACAG
AAGGACTTGA TATTGAATAT TTTTGCAGTG TCAGTTGTAT ATACCTTGCT TGGGATAGCG
GCAGCATTTT ATTACAAGTT TTTGATGGAT GATGTAATAC CGAATCTTTT GAAGAATACA
CTTCACATTA TAGCAGCAGG TGCGATACTG ATTACAATAT TCAAGGTGAT ATTAGGGGCA
TTCAGGGTAA GGCTTTTGAT ACATTTAAGT CAAAGATTAG ATATTAAGCT GATGCTGGGA
TATTATGAAC ATGTGATAGA GCTTCCGATG AGTTTTTTTG GTAGCAGGAA GATAGGGGAG
ATAATATCGA GGTTTATGGA CGCATCAAAG ATAAGGGATG CAGTATCTGG TGCAACTTTG
ACGCTAATGA TAGACAGCAT AATGGCAGTG GCAGGCGCAA GTATTTTATA CCTGCAAAAT
TCCACACTGT TTTTTATAGC GCTTGTGATG GTTTTGCTAT ACGCAGCAGT AGTGTTTGGA
TTTAACAGGG TATTGAAGGA AGCGAACAGG CAGGAGATGG AAGACAATGC AATTTTGACA
TCGTATTTGG TAGAGTCACT GAATGGGATA GAAGTAGTAA AGGCATTTAA TATAGAAGAG
GATGTAAATT TTAAGACAGA GAGCAAGTTT GTAAAGCTAT TAAAAGATGT GTTTAAGGTA
GCGAATTTAA ACAATTTGCA GAGTAATATA AGCAGCGCAA TAGCAGCGGT AGGAGTTATG
GTAATACTAT GGGTTGGTGC ACACAAAGTA ATAAATGGGC AGATGAGCAT AGGGGAGTTG
TTTACGTTCA ATGCACTGCT TGCATACTTT GTAGACCCGA TAAAGAACTT GATAGGATTG
CAGCCGATGT TGCAGACGGC GATAGTTGCA GCCGAAAGGC TGAGCGAAAT TTTGGAACTT
GAGAGTGAGT TTCAAGATGA CGAAGAAAGG AAATTATCAC CCAGTTTGAA GGGTGATATA
GAGATAGAGG GTTTGAACTT CAGATACGGT ACAAGACAGC TTGTGCTGAG GGATATAAAT
CTTAAGATAA GAAGAGGAGA GAAGATAGCG ATAGTAGATG AAAGTGGTTC AGGTAAGACC
ACGTTAGCAA AATTGCTTTT AGGATTTTAT GATTATGAAA GCGGAGAGAT AAGAATAAAT
GGCTATAACT TAAAAGATAT AAACAAGAAG CATTTGAGGG AGAAGATAGC ATATATATCT
CAAGACATCT TTTTGTTCAG TGGTACGATA TTTGAGAATT TGGTATTAGG CAACAGGAAT
ATAAAAATGG AAGATATAAT TGAAATAAGC AGATTAACCA CACTGGATGA GTTTGTATCA
AAACTTCCTT TGAGATACAA TACCATGATA GAAGAGAATG GAGCTAATTT GTCAGGCGGG
CAGAAGCAGC TAATAGCAAT AACCAGGGCA CTTTTAAAAA ATCCTGAGAT AGTGATAATG
GATGAAGCGA CCAGTAATCT TGATTCTGTA ACCGAGCAGG CGATAGGAAA GGTAATAGAG
AAGGTATGTG AGGGGATAAC CACTATAATA ATAGCGCACA GGCTATCCAC TATTTTGAAA
TGCGACAGGG TTGTGGTAAT GCATGAAGGC AGGATAGTAG AGGTGGGAAC GCATGAGGAG
CTGATGAGAA AGAAAGGGTA TTATTATAAC CTGTGGAGAG AGCAACTGAT GGGACTTGAG
CAAAAAGGGC TATGGGATTT GGTTGGGAGT GCAGCTGGAG GATGA
|
|---|
| Protein sequence | MRKRYYCVKQ HDITDCAAAS LATICLQYGK EVSIARIRQM AGTDRFGTTA YGVVKAAEKL
GFEAKAVRAE AKEAIFEKIP LPCIAHVLID GKLFHYVVIH EIRKERIVIA DPAKGIVKLN
PEEFFKIWTG ILILLVPNER FKKGKQEGVL KKFFKLLRPQ KDLILNIFAV SVVYTLLGIA
AAFYYKFLMD DVIPNLLKNT LHIIAAGAIL ITIFKVILGA FRVRLLIHLS QRLDIKLMLG
YYEHVIELPM SFFGSRKIGE IISRFMDASK IRDAVSGATL TLMIDSIMAV AGASILYLQN
STLFFIALVM VLLYAAVVFG FNRVLKEANR QEMEDNAILT SYLVESLNGI EVVKAFNIEE
DVNFKTESKF VKLLKDVFKV ANLNNLQSNI SSAIAAVGVM VILWVGAHKV INGQMSIGEL
FTFNALLAYF VDPIKNLIGL QPMLQTAIVA AERLSEILEL ESEFQDDEER KLSPSLKGDI
EIEGLNFRYG TRQLVLRDIN LKIRRGEKIA IVDESGSGKT TLAKLLLGFY DYESGEIRIN
GYNLKDINKK HLREKIAYIS QDIFLFSGTI FENLVLGNRN IKMEDIIEIS RLTTLDEFVS
KLPLRYNTMI EENGANLSGG QKQLIAITRA LLKNPEIVIM DEATSNLDSV TEQAIGKVIE
KVCEGITTII IAHRLSTILK CDRVVVMHEG RIVEVGTHEE LMRKKGYYYN LWREQLMGLE
QKGLWDLVGS AAGG
|
|---|
| |