Gene Athe_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0127 
Symbol 
ID7408489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand+ 
Start bp149984 
End bp150964 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content34% 
IMG OID643714535 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_002572058 
Protein GI222528176 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA CACTTTACAT TACCTCAAAC GGAAGACTCA GAAGAAAAAA CAATACCTTG 
TACTTTGAGA CAGAGACTGA AAAAAGGTCA ATTGATATCG AAAACATTGA ACAAATTCAC 
ATCTTTGGTG AAGTCGATTT GAATACCAAG ACTTTGAATT ATATCTCTCA ATACGGCATA 
GTTCTTCACT TTTACAACTA TTACGGATTT TATTTGGGGA GTTTTCTGCC TCGAAAGAAA 
AACATTTCAG GAGATGTTGT TGTTCGGCAA GCACTTCATT ATCTTGATAG GGAAAAGAGA 
ATCTTCTTGG CATACTGTTT TGTCGAATCA GCGGTTTATC ATATGATGAG AAATTTAAGA 
GAAAGAAAAA AAACAGAGGC TTTTTTGAAT GCAATTGAAG ATGAATGGGA AAATGGCAGG 
TTTAATATTT CAAGCATATC AGAGCTTATG GGGCTTGAGG GAAGAGTGAG GAATATTTAC 
TATTCGTCTT TCAATCAGTT TTTGCCAGAA GACTTTTACA TGGAAAAGCG TGAAAAAAGA 
CCACCGACAA ATCCGATAAA TGCTTTGATT TCATTAGGAA ATAGCCTAAT TTATAGCACA 
GTTTTAACAG AGATTTACCA TACTCAGCTT GACCCAAGCA TAAGTTTTTT GCATGAACCA 
AGTGAAAAGA GGTTTTCATT AAGTCTTGAT ATATCTGAAA TTTTCAAACC TCTGATTGTG 
GATAGTGTAA TTTTCAAGCT TTTGAATAAT CATCAGCTTA CACTTGAACA CTTCGATGAG 
GATTTGAATT ATTGCTACTT GAATCAAGAT GGAAAAAAGA TTTTTATCAA TGAACTAAAA 
AACAAGCTTG AGACAACAGT TCGTCACAGA CAGCTAAATA GAAATGTTTC CTATAAGGGA 
TTTATAAGAC TTGAGTGTTA CAAGCTGATA AAACATTTTA TAGGCGATCA GGTTTACTCG 
CCACTTAAGG CGTGGTGGTA A
 
Protein sequence
MQKTLYITSN GRLRRKNNTL YFETETEKRS IDIENIEQIH IFGEVDLNTK TLNYISQYGI 
VLHFYNYYGF YLGSFLPRKK NISGDVVVRQ ALHYLDREKR IFLAYCFVES AVYHMMRNLR 
ERKKTEAFLN AIEDEWENGR FNISSISELM GLEGRVRNIY YSSFNQFLPE DFYMEKREKR 
PPTNPINALI SLGNSLIYST VLTEIYHTQL DPSISFLHEP SEKRFSLSLD ISEIFKPLIV 
DSVIFKLLNN HQLTLEHFDE DLNYCYLNQD GKKIFINELK NKLETTVRHR QLNRNVSYKG 
FIRLECYKLI KHFIGDQVYS PLKAWW