Gene Athe_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0031 
Symbol 
ID7407266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp39166 
End bp40521 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content39% 
IMG OID643714441 
Producttryptophan synthase subunit beta 
Protein accessionYP_002571966 
Protein GI222528084 
COG category[R] General function prediction only 
COG ID[COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) 
TIGRFAM ID[TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAGG AGTTTTACAA GGTCTTTTTA ACTGAAGATG AGATACCTCA TAGCTGGTAT 
AACATCACTG CTGATTTAAA AACACCACTT GACCCGCCGC TTGACCCATC AACAAAAGAA
TTGATTGACC CAAGTAAACT CAAAGCAATT TTCCCTGAAG AGCTAATAAA ACAAGAGATG
ACAACAGAGG CATTTGTACC AATTCCAGAG GAAGTGTTAG AGTTTTACAA ACAGTACAGA
CCAACTCCGC TTATCAGAGC AAAACGACTG GAAAAAATTC TTGATACTCC TGCAAAAATA
TTTTATAAGT ATGAAGGTGC AACTCCATCT GGAAGCCACA AGTTAAATAC TGCTATACCA
CAGGCATATT ATAACAAAAA AGAAGGAATA AAAAGGCTTG CAACAGAGAC AGGTGCGGGC
CAGTGGGGGT CTGCTTTGGC AATTGCCTGC AACTTCTTTG GACTTGATTG CACAGTATAC
ATGGTAAAGG TAAGCTACAA TCAAAAGCCT TACAGAAGGA TATTAATGGA AACATTCGGA
GCAAAGGTAA TACCAAGTCC AAGTGAACTT ACAGAGGCAG GAAGAAAAAT TCTTGCACAA
GATCCGAACT CACCCGGAAG CCTTGGCATT GCAATAAGCG AGGCAGTGGA AGATGCCGCA
ACTCATCCTG ATACAAACTA TTCCTTAGGA AGTGTTTTAA ATCATGTTAT TTTGCATCAA
ACTATAATTG GAGAAGAAGC AAAACTACAA ATGGAAAAGA TAGATGAATA TCCCGACATA
GTTATTGGAT GCTGCGGAGG TGGCAGCAAC TTTGCAGGAA TTAGCTTTCC TTTCTTGAGG
GATAAATTAA GAAATGGAAG GAATGTAAGA GCAATAGCAG TTGAACCTGC GGCATGTCCA
ACTTTAACAA AAGGTAAGTA TACATATGAC TTTGGAGATG TTGCAGGGCT CACACCTCTT
CTTAAAATGT ACACGGTAGG AAGCCAATTC GTTCCACCAA GTATTCATGC AGGAGGGCTC
CGATATCACG GTGATTCGCC GATTGTTAGC AGACTTTATA AGGATGGAAT AATTGAAGCA
AGAGCATATA AACAAAGAGA AGTATTTGAA GCAGCTATTT TATTCGCAAG ATCAGAAGGC
ATTATTCCAG CGCCTGAATC TGCTCATGCT ATCAAAGCTG CAATAGATGA AGCAATCAAA
GCACGTGAAG AAGGTGTCAG AAAGACAATT TTAATTTCCT TGAGCGGACA TGGTAACTTT
GATTTAGCTG CATATGATGA TTATTTAAAC GGCAGGCTTG AGGATATTGA GATTTCTGAT
GAAGATATTA AAAAATCATT GATCAAATTG CCATAA
 
Protein sequence
MREEFYKVFL TEDEIPHSWY NITADLKTPL DPPLDPSTKE LIDPSKLKAI FPEELIKQEM 
TTEAFVPIPE EVLEFYKQYR PTPLIRAKRL EKILDTPAKI FYKYEGATPS GSHKLNTAIP
QAYYNKKEGI KRLATETGAG QWGSALAIAC NFFGLDCTVY MVKVSYNQKP YRRILMETFG
AKVIPSPSEL TEAGRKILAQ DPNSPGSLGI AISEAVEDAA THPDTNYSLG SVLNHVILHQ
TIIGEEAKLQ MEKIDEYPDI VIGCCGGGSN FAGISFPFLR DKLRNGRNVR AIAVEPAACP
TLTKGKYTYD FGDVAGLTPL LKMYTVGSQF VPPSIHAGGL RYHGDSPIVS RLYKDGIIEA
RAYKQREVFE AAILFARSEG IIPAPESAHA IKAAIDEAIK AREEGVRKTI LISLSGHGNF
DLAAYDDYLN GRLEDIEISD EDIKKSLIKL P