Gene Athe_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0004 
Symbol 
ID7407239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2761 
End bp3822 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content32% 
IMG OID643714418 
ProductDNA replication and repair protein RecF 
Protein accessionYP_002571943 
Protein GI222528061 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000383314 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA AAAGCATTTA CGTTGAAAAT TTCAGGGGTT ACAAACAAAG GTTTTTTGAG 
TTCAAAGATA AAATGAATTT AATTGTCGGT AATAATGCCT CAGGAAAGAC TTCTCTTCTT
GAGGCTCTAT ATTTTTGTAT GTGTGGAAAA TCTTTTAAAA GTCGAGATAT AGATGCAATA
AACTTTGATT CTTTCTATTT CAAGCTTGAG ATGTTGGCCG AGGTTGGAGA CACTGAATAT
AATGTTTTCT GTTATGTAGA TAAAGCCTTA GATAAGAGAA TAATGATAAA TGATAAGAAA
ATAAAGAAAT TGTCTGAGCT GATAAGTACA TTTAAATTTG TCTTTTTTGA GCCAGATGCA
ACAGAACTTA TAAAACATCA GCCAAAACTG AGGCGCAGAT TTTTAGATAT GGAAGTTACA
AAGCTTTACC CTTACATGAC AAAAGTTTAT TCAGAGTACC ACAGAGCACT TCTTTCACGA
AACGCGTTTT TGAAAAGTTA TGATAAAAAG GATATAATAG ATGTGTACGA TATGCAAATA
AGTCAGCTTG GATTTTTAAT TTTTCAAAAA CGACAGGAGG TTATAAATAA ACTATCCATT
GAAGCGCAAA AGATATTTAG TTTAGTGTTT GAAAACAAAT CAATGCTTGA ACTTAAATAT
ATGCCATCAA TTGCTGCTTC AACCGAGAAA GAATATTACA AAGAGATAAA AAAGAATATT
GAGAAAGATT TGAGTCTTGG ATATACAACA AAAGGTGTTC ACAGAGATGA CTTTGAGATT
TTGATAGATA AAAAACCGGC AATAAATTTT GCATCTGAAG GACAGATAAA ACTTGCGGCA
GTCTCAGTTG TGCTTGCAAC TTCTCTTCTT TATTCGGAGC CTGTGCTAAT TTTAGACGAT
GTGTTTTCTG AGCTTGATAG TTTTAAAAGA AAAAATCTTG TGAAATTTAT AAGCCAATAC
CAGTCGTTTG TGACATCTGC AGAAGATTTA AGTGTTCTTG AAAGAGAAGA AATACTGGAG
TTTGGCAGTG CAAACTTGAT TTTTCTTGAA AGAAGTATGT AA
 
Protein sequence
MKIKSIYVEN FRGYKQRFFE FKDKMNLIVG NNASGKTSLL EALYFCMCGK SFKSRDIDAI 
NFDSFYFKLE MLAEVGDTEY NVFCYVDKAL DKRIMINDKK IKKLSELIST FKFVFFEPDA
TELIKHQPKL RRRFLDMEVT KLYPYMTKVY SEYHRALLSR NAFLKSYDKK DIIDVYDMQI
SQLGFLIFQK RQEVINKLSI EAQKIFSLVF ENKSMLELKY MPSIAASTEK EYYKEIKKNI
EKDLSLGYTT KGVHRDDFEI LIDKKPAINF ASEGQIKLAA VSVVLATSLL YSEPVLILDD
VFSELDSFKR KNLVKFISQY QSFVTSAEDL SVLEREEILE FGSANLIFLE RSM