Gene Hlac_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3577 
Symbol 
ID7402492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand+ 
Start bp331690 
End bp332262 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content50% 
IMG OID643710115 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_002567681 
Protein GI222481445 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCAT TAAACGAGTT TGTCTACTGT CCACGCCGAT TTTATTATCA GCACTACCAC 
GACGAGATGG GAACACCATA CGAGCTTATA GATGGGCGAT CAAAACACGA AAAGCAGTCT 
CAAAGAGGGG GATGGATCAC CGAGAGATAT TTCAGAGCAA CCGAACTCGA TCTCCACGGA 
AAAATTGATT TGATCGAATC GGGTGGGGAT GTACTCACAC CAGTAGAGCG GAAGCGTGCC 
GAAAGCGGAC AGTATTTCCC AAGTGACGAG GTGCAGCTTG CGGGCTACTG TATGTTACTT 
GAAGCCGCAA TCGAGGAGCC AGTTAATGTC GGCTATATTT ATTTGTATGA AACTGATGAG 
CGGTACGCGA TCCAAATCAC AGAGAGCCAT CGAGAAACGG TACACAAGAT CATCGATAAA 
ATCCGATCAA TGTCAGTCGA CTCAATCCCT CCACTCACGG ACAACCCAAA GAAGTGTGAA 
GCCTGCTCAG CACGGGAGTA TTGCATGCCC GAGGAGACAG CCATCCTGGA GCCCGAGAAA 
GCCCAGGGTA CGGGCTGGGA GGGCGAGGTA TGA
 
Protein sequence
MSALNEFVYC PRRFYYQHYH DEMGTPYELI DGRSKHEKQS QRGGWITERY FRATELDLHG 
KIDLIESGGD VLTPVERKRA ESGQYFPSDE VQLAGYCMLL EAAIEEPVNV GYIYLYETDE 
RYAIQITESH RETVHKIIDK IRSMSVDSIP PLTDNPKKCE ACSAREYCMP EETAILEPEK 
AQGTGWEGEV