Gene Hlac_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3540 
Symbol 
ID7402383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp289458 
End bp290399 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content65% 
IMG OID643710078 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002567644 
Protein GI222481408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCTCGC AGCGAACCGG CGCGTTGTTT CTCGTTTCGG CGGTTCTGTT CGGTGGGACC 
TTCATCGCAG CGAAGGCCGG ATTGGCGTAC TTTCCGCCGC TGTTTTTCGT CGCCGTTCGC
TTCGACATCG GAGCGGTCGT CCTGGCGGCG TTCGCAGCGA CCAGCCTTTC TCGGTCGGAG
TTACGGCCGC GGACCGTCGG CGACATCATC GGCATCCTCG CAACGGGCGT GCTCGTCATC
GGGCTAACGA ACGCGCTGTT GTTCGTCGGT CAACAGGACG TGACCAGCGG TGTGGCCGCG
GTCGTCTTCA GCCTGAACCC GATTCTGACG CCGGTGTTCG CCGCCGTCTT GCTTTCGGAA
GATCGGCTTT CGGTTCGCGG CTCGGCGGGG ATGGTGCTGG GGCTGCTCGG CGTCGGGCTG
GTCGCGAATC CCGATTCGAC GGCGCTGCTT GGTGGCGGGA TCGGGATTCC GCTGCTGTTC
GGCGCCGCCG TGACGAGCGC GCTCGGTGCC GTGGTGATTC GTCGCGCTGA GTCGACGATG
TCGAGCACGG CGCGGACCGT CTGGGGCGTC CCGCTGGCGG CCGTTCTCTC GCACGGTCTC
AGCCTCTCGG CCGGTGAATC CGTCACCGGG CTCTCGGTGC CCCCAGTCGC GCTCGCAGCG
CTGCTCTACG TCGGCGTCTT TTCGGGAGCG ATCGCGTATC TCGCTTACTT TGCGCTCATC
GACGAGACAG ATGCGACGCA AGCGAATCTC CTGTTTTATT TCGTCCCGAT CGTCTCGGCG
GTCGGGGGCT GGGTCCTGCT TGGAGAGACG CTGTCGCTCG TCTCACTGGT CGGGTTTGGA
GTCATCTTCG TCGGTTTCCT GCTCGTCAGT GGTCTCCCAA CCGGCGTTTC GGGAGTACTC
AGGCGTGCCG TCGACGGTCA GTTCGTCGGC AGTAGTTCCT AA
 
Protein sequence
MFSQRTGALF LVSAVLFGGT FIAAKAGLAY FPPLFFVAVR FDIGAVVLAA FAATSLSRSE 
LRPRTVGDII GILATGVLVI GLTNALLFVG QQDVTSGVAA VVFSLNPILT PVFAAVLLSE
DRLSVRGSAG MVLGLLGVGL VANPDSTALL GGGIGIPLLF GAAVTSALGA VVIRRAESTM
SSTARTVWGV PLAAVLSHGL SLSAGESVTG LSVPPVALAA LLYVGVFSGA IAYLAYFALI
DETDATQANL LFYFVPIVSA VGGWVLLGET LSLVSLVGFG VIFVGFLLVS GLPTGVSGVL
RRAVDGQFVG SSS