| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_3536 |
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| Symbol | |
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| ID | 7402379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012030 |
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| Strand | + |
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| Start bp | 283080 |
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| End bp | 284918 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643710074 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002567640 |
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| Protein GI | 222481404 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATCG ATGACACAGG GGGAGGCAAT GAACAGGCTG ATTCCGGGGG TGGAGTTGGT
AGGGATCCGG CCACTACTGT CGGGGACTAC TCCTGGAGTG ATTTTCGCCG TGAAGAACAC
GATGGGGGAC AGTTCGACCG GACGGCGTAT CTCGGCTTCG ACCCGAGAGA CCTCCCTCGG
AAGCTCGAAG CCGGCGCGAG CGCCGGCAAG ACACTTCAAG AACAGTTCGA GGAGTTCTGT
GACCCTGAAC GCACCCCTGT CGTAAAGGAC ACGTACTCCT GGGAACACTT CAAACGGGAG
TACTACTACG ACAAGAACGG GAACGCGCCT CGGTCGAGCG ACGGGGAAAA AGAACCGTTC
GAAGCAGCAC AGTATCTCGG CTTCGACCCC GACGAAACCG ATGACCGATT AAGCCACGCC
CAGTCGATCA CGTCAGACCT CGAGAATCTC GTTGACGAAC GGACAGTCAA CGTCGCCGAG
GAACTCGACG AGGACGCATT CTTCTCGGAC CGTTACGGCA ACACGACAGT CGTCAATCGG
TACGATCTCG AAAAGTCTGT TCCGTTGGAG AAGAAGACCC ACTTCGTCGA AGAGAACCGC
TACTGGGTGA ACAAGCCCTA CGCCTGTGTC ATCATCTTTC ACTCCCGAAA AGAAAATGAG
CGCAAATACT ACGTTATCGA ACCGCACCTC AACGACATCG AGAACGAACT GAAGGATTTC
CTCTCCCGGA AGCTCAAAAC CGCTATCAAA TACTCCGAAG ACGACGTCAT CGTCCAGGGC
GACGAGAACG ACCGCGCAGA GGTCATTCAG CGCGAGGCCG AACGGCTTTT GCAGCGCTAT
GGACTCTACG ACGGGACGAT AACAGACGAC ACTGGGTCCG CCGAGAGCGG CGGCATGATG
GGCTCGCTCA AGGAGATGCT CGGAATGGAC GATGTCCAAC CGGAGGTCGA AGAGAGCGGA
GTCGACGGTA TCGAAGTCCG TCCCGAACCG ATTATACTCG AAGAGGACCC CGACACACTC
ACCGAGTACC AGGTCGAGAA ACTCCTCTAT CTGCTCAAGC GAAACTTCAT CGGTTACGCC
AACATCGACC CGGTCAAACA CGATATCAAC GTCGAGGACA TCTCCTGTGA CGGGTACAAC
AGCCGCGTGT TCGTCTACCA TACAGACTAC GAACAGATAA TTTCGAACGT CACGCACGGC
GAGAAGGATC TGGACGACTT TGTCGTCAAA CTCGCGCAAC GCTCCGGCAA GGGCATTTCG
AAACGCCAGC CGCAGGTAGA CGCGACGCTC CCGGACGGAT CGCGTGCCCA GCTCACACTC
GGCCGGGAAG TCTCCGACCA CGGGACTAAT TACACCATCC GTCAGTTCAA GGACGTTCCC
TTCACCCCAA TCGACCTCAT CAACTGGAAC ACGTTCAATC TCGACGAGAT GGCTTTCCTC
TGGCTCTGTA TCGAGAACCA CAAGTCGCTC ATCTTCGCCG GCGGGACGGC GTCCGGGAAG
ACGACCAGCC TGAACGCTAT CTCTCTGTTC ATACCTTCGA ACGCTAAAAT CGTCTCAATC
GAGGACACCC GCGAGGTCGA ACTGCCCCAG CGAAACTGGG TCGCCAGCGT CACTCGTCCC
TCCTTCGGAC AGGATGACAC CGGCGACGTC GACGAGTTCG ACCTGCTGGA GGCTGCACTC
CGTCAGCGGC CCGACTATAT TGTCATGGGT GAGATTCGGG GTGAGGAGGG TCGAACGCTG
TTCCAGGTCA TGTCGACTGG ACACACTACT TACACCACGT TCCACGCCGA CTCCGTGGGC
GAGGTCATCA AGCGGTTTAC GACTGAACGG CTCTGTTGA
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| Protein sequence | MAIDDTGGGN EQADSGGGVG RDPATTVGDY SWSDFRREEH DGGQFDRTAY LGFDPRDLPR
KLEAGASAGK TLQEQFEEFC DPERTPVVKD TYSWEHFKRE YYYDKNGNAP RSSDGEKEPF
EAAQYLGFDP DETDDRLSHA QSITSDLENL VDERTVNVAE ELDEDAFFSD RYGNTTVVNR
YDLEKSVPLE KKTHFVEENR YWVNKPYACV IIFHSRKENE RKYYVIEPHL NDIENELKDF
LSRKLKTAIK YSEDDVIVQG DENDRAEVIQ REAERLLQRY GLYDGTITDD TGSAESGGMM
GSLKEMLGMD DVQPEVEESG VDGIEVRPEP IILEEDPDTL TEYQVEKLLY LLKRNFIGYA
NIDPVKHDIN VEDISCDGYN SRVFVYHTDY EQIISNVTHG EKDLDDFVVK LAQRSGKGIS
KRQPQVDATL PDGSRAQLTL GREVSDHGTN YTIRQFKDVP FTPIDLINWN TFNLDEMAFL
WLCIENHKSL IFAGGTASGK TTSLNAISLF IPSNAKIVSI EDTREVELPQ RNWVASVTRP
SFGQDDTGDV DEFDLLEAAL RQRPDYIVMG EIRGEEGRTL FQVMSTGHTT YTTFHADSVG
EVIKRFTTER LC
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