Gene Hlac_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3275 
Symbol 
ID7402421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp11842 
End bp13371 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content54% 
IMG OID643709832 
Productglycosyl transferase family 2 
Protein accessionYP_002567398 
Protein GI222481162 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCAAG GCAAGACACT GAAACGTCGA CTCACCTCAG TCGAGTGGTC ATCCTTGATC 
CTGTTCTGTT CAGCACTCGT GCCGTTCGGG CTTCTCATTC GACTCATGCA GCCGGAAACG
GTGTTCGCAC TCGGTACACT GATTGGAGTG ATCACGATTT ACGGTGGCTG GTCGTACCTC
GTGATTAAGT TCGATAGCCC CTACGCGACA CTGTTCTCTT GGAAAGGGCT CTGTGTCGCC
TTCGTCTGTT ATGGGTTCGG GGTCGTCACA CTCGGCTGGG TACAACCGTC GCTCACTTCT
GGGGTGTATC TGTTCGCAAT CGCCCTGATC TTTCTGTACT ACTGGTTTAT CGCCCTCGCC
GCAGTCTATC ACAACCAACG TTATCACTCA CAGGACGCTC CACCAGAACC CAGCGCGTCG
ATCAGTATCA TCGTACCAGC CTACAACGAG GAAGGGTACA TCCAGCGAAC GATTACCGCA
CTCTTGGATG CTGACTACCC CGACGGGAAG CGAGAGATCA TCGTCATTGA CGATGGGAGC
ACTGACAACA CCTGTGCAGA GGCTCGGGCC TTCGAGTCCG AAACCGTCAG CGTCGTCACA
AAGGATAACG GCGGCAAATA CTCGGCGCTG AACTACGGCC TCCTGTTCGC GTCGAACGAG
ATCATACTCA CCGTCGACGC CGATAGTGTC CCCGAAAAAG ATGCGCTCAA ACAGATGGTC
GCTCCACTAA GCGACCAGTC GGTGGGTGCG GTTGCCAGCA CGGTGACGAT CTGGAACCGA
GGGTCGCTTC TAACGGGGTG TCAACAGTTG GAGTACACCA TCGGTGTCAA CGTCTACCGG
CGGATGCTGG ATCTGTTTGG GATCGTGATG GTCGTACCAG GTTGTCTCGG AGCCTACCGG
CGGGATGTAC TCGACGAAAT TCAGGGGTTC GATCCACAGA CGCTCACCGA AGATTTTGAT
ATCACCGTCA AAGTGCTTCG TGCTGGCTAC GAAGTCCGAA GTTCCGAGGC ACGTGTCTAC
ACTGAGGCCC CGGATTCATT ACGTGATCTC TACAACCAGC GGCTCCGCTG GTATCGAGGG
AACTATATGA CCATATTCAA ACATCGAGGG GTTCTCTCGG AGCCGACGAC AGGGTTTCTG
TACCGGTTTG CCTTTCCACT TCGATTGGTT GAGCTCTTAT TTCTCCCGTT TGCGAGCTGG
GTGATCCTCG GGCTCATCGT GAAAATCCTG CTAAGTGGCT TTGTTATCCA AGTAGTCTCG
TTGTTTATTT TTTTCCTGAG TATTATCTTC CTGATCGCTG CTCTTGGAGT CTACATCGAA
GGTGAAGATT GGCGGCTGCT GTGGTATACG CCCCTGTTTT TAGTCGGTTA CAAGCATTTC
CACGACGCGT TGCTGCTCAA GAGTCTCGCC GACGTATTGT TGGGCCGAAA CTTGTCGTGG
ACGCGAGCCA CACGTATCGA ACAGAGATCT AACCAACCTA CACAGTCCAA CCAAGTCGAA
TCTGACGCCG AAGTCGAAAC CGCCGACTGA
 
Protein sequence
MSQGKTLKRR LTSVEWSSLI LFCSALVPFG LLIRLMQPET VFALGTLIGV ITIYGGWSYL 
VIKFDSPYAT LFSWKGLCVA FVCYGFGVVT LGWVQPSLTS GVYLFAIALI FLYYWFIALA
AVYHNQRYHS QDAPPEPSAS ISIIVPAYNE EGYIQRTITA LLDADYPDGK REIIVIDDGS
TDNTCAEARA FESETVSVVT KDNGGKYSAL NYGLLFASNE IILTVDADSV PEKDALKQMV
APLSDQSVGA VASTVTIWNR GSLLTGCQQL EYTIGVNVYR RMLDLFGIVM VVPGCLGAYR
RDVLDEIQGF DPQTLTEDFD ITVKVLRAGY EVRSSEARVY TEAPDSLRDL YNQRLRWYRG
NYMTIFKHRG VLSEPTTGFL YRFAFPLRLV ELLFLPFASW VILGLIVKIL LSGFVIQVVS
LFIFFLSIIF LIAALGVYIE GEDWRLLWYT PLFLVGYKHF HDALLLKSLA DVLLGRNLSW
TRATRIEQRS NQPTQSNQVE SDAEVETAD