| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2520 |
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| Symbol | |
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| ID | 7401572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2498240 |
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| End bp | 2499598 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643709592 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002567163 |
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| Protein GI | 222480926 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.420378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACACG ACAGCCGATC CGACGACAAC AACCGCCTTA CGCGTCGCCA CTACGTGGCC
GGCGCCGGTA CCCTCGCAAC CGTGGGGATC GCCGGCTGTT CCGGCGGTGG CGACGGCAGT
GACGGTTCCG ACGGCAGTGA CGGCAGTGAC GGTTCCGACG GCTCCGACGG GAGCGACGGC
GGCTCCGGTG AGCCTGTCGA GGTACTCCAC GGCTGGACCG GCGGCGACGG CGCCGCCGCG
GCCGAGGCAT TGGAGGCAGC GTTCAACGAG GTTCACCCCG ATGTCGGCCT CGAGATGAAC
CCCATCGGCG GCGGCGGCAA CCAGAACCTC GACGCAGTCG TCGCGAACCG ACTCCAGAGT
GACGATCCGC CGGGATCGTT CGCCGGCTGG CCCGGTCCGA ACCTCCTCCG CTATCAGGGG
GTCCTCGGCA GCGTCGACGA CGTTTGGGAG GAGAACGGCT TCGAGGACGC GATGGTCGAG
GAGGCGGTCG AGCTCCACAA GCAGAACGGC AGCTACCGCG CCGTGCCGCT CGGCTCCCAC
CGACTGAACT GCCTCTTCTA CAACGTCTCC GTCGTCGAGG ACGCGGGGAT CGATGTCGAC
TCGCTGAATA GCCCCTCGGC ACTCATCGAC GCCTTCGAGA CGGTTTCCAG CGAGACCGAC
GCGATTCCGA TGACCCACGG GATGTCCGGG ACGTGGACGA CGACGCAGCT GTGGGGCGCC
GTGATGCTCG GCGTCAACGG CTACCAGCCG TATATGGACT TCCTCGAGGG TAACGGCGAC
GAGAGCGCCG TCCGGTCGGC GTTCGAGACG ACCGCAGAGA TGCTGGAGAA CCATATCAGT
GACGACGCGG CTTCGATCGG TCTGACCCAG TCGAACCAGA ACATCATCAA CGGCGACGCC
GCGTTTATCC ACCAAGGTAA CTGGGCGGCG GGCGCGTTCC GGAACGCCGA GAACTTCGAG
TACGGAGACG ACTGGGGCTT CAAGACGTTC CCCGGGACCG AGGGAATGTA CACCCTCCAC
TTCGACTCGT TCCTCTACCC GTCGGACAAC CCGACGCCCG AGGCCTCGAA GACCTGGGAG
GCGTTCGCCG GCAGCCCGGA GGCCCAGATC GCGTTCAACC AGTACAAGGG CTCGATCCCG
ACTCGGACCG ACGTGAGCAT GGAGGAGTTC GGTCCGTACC TCCAGGAGAC GGCCGAGGAC
TTCGCGAACG CGGAGTACCG ACCGCCGAAC CTTCAGCACG GCCTCGGCGT CCCCTCCGAG
ACGATGACGG CGCTCAACGA CGTCATCTCT TCGGAGTTCA CGGGACCGTA CAACGTCGAC
GCCGCGACGC AGGGCTTCCT GAACGCGGTG TCGAACTGA
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| Protein sequence | MSHDSRSDDN NRLTRRHYVA GAGTLATVGI AGCSGGGDGS DGSDGSDGSD GSDGSDGSDG
GSGEPVEVLH GWTGGDGAAA AEALEAAFNE VHPDVGLEMN PIGGGGNQNL DAVVANRLQS
DDPPGSFAGW PGPNLLRYQG VLGSVDDVWE ENGFEDAMVE EAVELHKQNG SYRAVPLGSH
RLNCLFYNVS VVEDAGIDVD SLNSPSALID AFETVSSETD AIPMTHGMSG TWTTTQLWGA
VMLGVNGYQP YMDFLEGNGD ESAVRSAFET TAEMLENHIS DDAASIGLTQ SNQNIINGDA
AFIHQGNWAA GAFRNAENFE YGDDWGFKTF PGTEGMYTLH FDSFLYPSDN PTPEASKTWE
AFAGSPEAQI AFNQYKGSIP TRTDVSMEEF GPYLQETAED FANAEYRPPN LQHGLGVPSE
TMTALNDVIS SEFTGPYNVD AATQGFLNAV SN
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