Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2449 |
Symbol | rpl3p |
ID | 7400567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2427187 |
End bp | 2428203 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643709522 |
Product | 50S ribosomal protein L3P |
Protein accession | YP_002567094 |
Protein GI | 222480857 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03626] archaeal ribosomal protein L3 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAAC CAAGCCGACC ACGAAAAGGC TCGCTGGGCT ACGGCCCGCG TACCCGCGCA GACCGAGAGG TCCCGCGCAT TCGATCGTGG CCCGACGACG ACGGAGCCCC CGCATTGCAG GGGTTCGCCG GCTACAAAGC CGGAATGACG CACGTCGTTA TGGTCAACGA CGAGGCCAAC TCGCCGCGTG AGGGGATGGA AACGTCCGTT CCCGTCACTG TCGTCGAGAC GCCGCCGATG TACGCGGTGG CCCTGCGTGC CTACGAACAG ACGCCGTACG GAAAGAAGCC GGTCGAAGAG GTTTGGGCGA CCGAGTTCCA CGAGGAGCTC GACCGCGCGC TCGACCTCCC GGCGGAAGAT ACCTTCGAGG AAGACGCCGA CGAACTGCGT GCGCTGCTCG ACGAGGGCGC GGTCGACGAC GTCCGCGTCA TCACGCACAC CGTCCCCTCG GAGCTCGCGA ATGTACCCAA GAAGAAGCCC GACGTGATGG AGACCCGAGT CGGCGGCGGC TCCCTCGAGG AGCGCGTCGA CTTCGGGCTC GACCTCGTTG CCGAGGGCGG CGCCCACGAG TTTGGCGACG TCTTCCGCGC GGGTCAGTAC ACCGACGTAT CGGGTATCAC GAAGGGGAAA GGGACTCAGG GTCCCGTCAA ACGCTGGGGC GTTCAAAAGC GGAAGGGCAA ACACGCCCGC CAGGGATGGC GGCGCCGGAT CGGCAACCTC GGTCCGTGGA ACCCCTCCCG CGTTCGCTCT ACCGTTCCCC AGCAGGGGCA GACCGGCTAC CACCAGCGCA CCGAGCTCAA CAAGCGCCTC ATCGACTTCG GCGAGGGCGA CGACGCCTCC GTCGACGGCG GCTTCGTCAA CTACGGCGAA GTCGACGGTG AGTACGCGCT CATCAAGGGC TCGCTGCCCG GTCCGGACAA GCGCCTGATT CGGTTCCGCC CGGCCATCCG GCCGAACGAC CAGCCGCGCC TCGATCCCGA GGTCCGGTAC GTATCCACCG CATCCAACCA GGGATAA
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Protein sequence | MPQPSRPRKG SLGYGPRTRA DREVPRIRSW PDDDGAPALQ GFAGYKAGMT HVVMVNDEAN SPREGMETSV PVTVVETPPM YAVALRAYEQ TPYGKKPVEE VWATEFHEEL DRALDLPAED TFEEDADELR ALLDEGAVDD VRVITHTVPS ELANVPKKKP DVMETRVGGG SLEERVDFGL DLVAEGGAHE FGDVFRAGQY TDVSGITKGK GTQGPVKRWG VQKRKGKHAR QGWRRRIGNL GPWNPSRVRS TVPQQGQTGY HQRTELNKRL IDFGEGDDAS VDGGFVNYGE VDGEYALIKG SLPGPDKRLI RFRPAIRPND QPRLDPEVRY VSTASNQG
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