Gene Hlac_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2420 
Symbol 
ID7400538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2409852 
End bp2410439 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content64% 
IMG OID643709493 
Producthypothetical protein 
Protein accessionYP_002567065 
Protein GI222480828 
COG category[S] Function unknown 
COG ID[COG2210] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.96805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG ACACACCGGC GTCGACGAAC GACGATCTCG ATCCCGAAGC CGTCGCCGAC 
TTGCAGGCCC GCATCGACGC ACTCGAGACC GAGGTATCGG ACCTCCGGAC CGACGTCGAC
GACGACGGTC CCCAGAAGAT GGTCATCATC GCGACGAAGG GGACGCTCGA TATGGCGTAC
CCGCCGCTCA TCCTCGCGAG CACCGCGGCC GCCTTCGGCT ACGACGTCAC CATCTTCCAC
ACGTTCTGGG GTCTCGAGAT CCTCCACGAG GAGAACTCGA AGAACCTCCA GCTCAGCTCC
GTGGGGAACC CGAACATGCC GGTCCCGAAC ATGATCGCCG CGCTCCCGGG CATGGACCGG
ATGACGACGC GCATGATGCG CAACAAAATC GACGACAACG ACGTCGCGAC GGTGGAGGAG
CTCATCGAGA CCTCGCTCGC GAGCGGCGTC GAACTGCAGG CGTGTCAGAT GACGATCGAC
CTGCTCGGCT ACGACGAGGA CGACTTCTAC GACGGCGTCA CGACCGGCGT CGGCGCTGCC
TCCGCGTTCC AGGACATGGT CGACGCGGAC ATCCAGCTAC TCGTCTGA
 
Protein sequence
MSADTPASTN DDLDPEAVAD LQARIDALET EVSDLRTDVD DDGPQKMVII ATKGTLDMAY 
PPLILASTAA AFGYDVTIFH TFWGLEILHE ENSKNLQLSS VGNPNMPVPN MIAALPGMDR
MTTRMMRNKI DDNDVATVEE LIETSLASGV ELQACQMTID LLGYDEDDFY DGVTTGVGAA
SAFQDMVDAD IQLLV