Gene Hlac_2302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2302 
Symbol 
ID7401918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2294500 
End bp2295381 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content73% 
IMG OID643709375 
Producthomoserine kinase 
Protein accessionYP_002566948 
Protein GI222480711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0083] Homoserine kinase 
TIGRFAM ID[TIGR00191] homoserine kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.591143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.310319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACGG TACGGGCACC CGCCACGAGC GCGAACCTCG GCAGCGGGTT CGACGTGTTC 
GGAGCGGCCC TCACACGGCC GGCGGACGTC GTCACCGTCG AGAAGGCGGC AGAGACGACG
ATCGAGGTCA CCGGCGTCGG GGCGCAGTAC ATCCCCGAGG ATCCCAAGAA GAACACGGTC
GGCGCCGTCG TGGAGGCGCT CGACGCGCCC GCGCGGATCC ACATCGACAA GGGGGTCCGC
CCGGCGTCCG GGCTCGGCTC CTCGGCCGCC AGTGCCGCCG GCGCCGCCGT CGCGCTCAAC
CGACTGTACG ACCGCGGGCT CTCGCGCTCG GAGCTGGTCC CGATCGCCGC CGAGGGCGAG
GCGGTCGTCT CCGGCGTCGC GCACTCGGAC AACGTCGCGC CCTCGATCCT CGGCGGGTTC
ACGGTGACAA CGAGCGAGGG GACCCACGCC GTCGACGCCT CGATTCCCCT CGTGGTCTGT
CTCCCCGACG TCGCCGTCTC CACTCGCGAC GCGCGCCGGG TCGTCCCCGA GACCGCCTCG
ATGGACGACC TCGTCGAGAC GGTCGGCAAC GCCGCCACTC TCGCGATCGG GATGTGCCGC
TCCGATCCCG ACCTCGTGGG CGCCGGCATG AGCGACCCCG TCGTCACCCC CGAGCGCGCC
CGCCTGATCA CGGGGTACGA CGAGGTGCGC GCCGCCGCCT TCGACGCCGG TGCAACCGGG
GTCACCGTCA GCGGCGCCGG TCCCGCGATT CTCGCCGTCT GCCGCGACGG GCAGCGACGC
GGGGTCGCCG CCGCGATGCT CGACGCTTTC TCCGACGCTG GCATCGACTC CCGCGCCTAC
CAGACGCGGA TCGGGCGGGG GTCGACGGTG CTTGAGGAGT GA
 
Protein sequence
MVTVRAPATS ANLGSGFDVF GAALTRPADV VTVEKAAETT IEVTGVGAQY IPEDPKKNTV 
GAVVEALDAP ARIHIDKGVR PASGLGSSAA SAAGAAVALN RLYDRGLSRS ELVPIAAEGE
AVVSGVAHSD NVAPSILGGF TVTTSEGTHA VDASIPLVVC LPDVAVSTRD ARRVVPETAS
MDDLVETVGN AATLAIGMCR SDPDLVGAGM SDPVVTPERA RLITGYDEVR AAAFDAGATG
VTVSGAGPAI LAVCRDGQRR GVAAAMLDAF SDAGIDSRAY QTRIGRGSTV LEE