| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2110 |
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| Symbol | |
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| ID | 7400630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2101284 |
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| End bp | 2102033 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643709180 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_002566757 |
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| Protein GI | 222480520 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.517822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.355951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATATCG GGCTCACCGT CGGCGACGAC CTCGACCGGC TCGCGGCGTC GCCGAAGCGG
TTCGACTTCT GCGAGCTCGG GGTCGGCGAG CCGACGCTCG TGCCGGGCGA TATCGACCCG
GAACGTCTCG ACGACGCGCT CGCCGGCCGC GATCTGCTCG TCCACCTCCC GTACAGCCAG
CGGCTGGCCA GCTACGTCCC CGAGGTCAAC GACGCCATCG TCGACTACCA GCGCCGACTC
TTGGAGGCCG CCGGCGAGTT GGGCGCGGAA AAGGCCGTCC TCCACGCGAC CTCCGCCGAC
CGCGACGACA CCGAGTTCCG CGAGGTCGCC GCCGAGCAGC TCCGGCGGGT CGCCGACGCC
GGCCGCGACG CGGGCGTCGA GGTCGTCGTC GAGAACGTCG GCCACCAGCA CGCGGGGCTC
CAGCTGTCCG TCCTCGGCGA TATCGCTCGG GAGACCGACA CCCGGATCTG CTTCGACCTC
GGCCACGCGT ATATGGAAGG CGACAACAAG GCGATCAAAC GGTTCCTCCG GAGCCACGGG
GGCCGGATCT CACACCTCCA CTGTCACGAC GCCCGCCGCC GGGGTGACAC CCACCTTCCC
GTGGGAGCCG GCGAGGTCGA CTACGGCCAC GTGGAGTCCG AACTCGGCGA TTTCGACGGG
ACGGTCGCCC TTGAGGTGTT CACCGACGAC GAGACGCTCC TCCTCGACTC GGCCCGACGG
ATCGCGGAGC GGCTCGGCGT CGACTTTTAA
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| Protein sequence | MDIGLTVGDD LDRLAASPKR FDFCELGVGE PTLVPGDIDP ERLDDALAGR DLLVHLPYSQ
RLASYVPEVN DAIVDYQRRL LEAAGELGAE KAVLHATSAD RDDTEFREVA AEQLRRVADA
GRDAGVEVVV ENVGHQHAGL QLSVLGDIAR ETDTRICFDL GHAYMEGDNK AIKRFLRSHG
GRISHLHCHD ARRRGDTHLP VGAGEVDYGH VESELGDFDG TVALEVFTDD ETLLLDSARR
IAERLGVDF
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