| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2063 |
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| Symbol | |
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| ID | 7400583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2052686 |
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| End bp | 2053708 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643709134 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_002566711 |
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| Protein GI | 222480474 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00929872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.185257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAATC GTCTCCGCGT GCTTACCGAG CGCGCGTACC GCCGGCACCT CCATCGAGAG
ATCGAGGACG TACCGACACA CGTCGCGATC ATCCAGGACG GAAATCGGCG GTACGCCCGG
GAGCGCGGCG ACAACGCGCC CGACGGCCAC CGGGCCGGCG CCGCTACCAC CGAGCGCGTC
CTCGACTGGT GCGCGGATTT GGGCGTCGCA GAGCTGACGC TGTACGCCTT CTCGACCGAG
AACTTCGAGC GCCCGGACGA GGAGTTGGAG CCGCTGTTCG ACCTGTTGGA GACCAAGCTC
CGCGACTTCG CCGACGCCGA CCGCGTCCAT GAGCAGGGAG TCCGCGTTCG CGCAATCGGC
GATGTCGACC GCCTCCCGGA GCGCGTGCGC GACGCGGTGG ACTACGCAGA GCGCCGCACC
GCCGACAACG ACCGGTTCAC GCTGAACGTC GCGCTGGCGT ACGGTGGCCG CACCGAACTG
CTCGACGCGG CGACGGCGAT CGCACGCGAC GTCGATGCGG GCGACCTCGA CCCGACCGAT
GTCGACGTCG AAACCGTCGA GGAGCGGCTG TACGATCGAC CGGTCCGCGA CGTCGACCTG
ATCGTCCGGA CCGGCGGCGA CGAGCGCACC TCGAACTTCC TCCCGTGGCA CGCCAACGGC
AACGAGGCGG CCGTCTACTT CTGTGCGCCG TACTGGCCGG AGTTCTCGGA GGTGGAGTTT
CTCCGTGCCA TCCGCACGTA CCAGTCGCGC GAGGAGTCGT GGCGGCAGGC CCGGGCGGAG
CGGGCGGTCG CGCTCGTTCG GGCGGTCGCC GAGGTGGAAA TCGCCGAGGC GCACGCGGTG
GCGGGGCGAC TCCGCGACCG GCTCCCGCTC GACGCCGACG CGCTCGCTGC CGCACTCCCG
GGCGACGACG AGGACGCGGT CGAGGATAGG TCTGAAGACG GATCCCCGCC CGAAACCGCA
ACCGAGAACG CGGGCCAAAC TCCGACCGGA GAACGCGACG CAGAGCCGGA GTCGGCGGAC
TAA
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| Protein sequence | MLNRLRVLTE RAYRRHLHRE IEDVPTHVAI IQDGNRRYAR ERGDNAPDGH RAGAATTERV
LDWCADLGVA ELTLYAFSTE NFERPDEELE PLFDLLETKL RDFADADRVH EQGVRVRAIG
DVDRLPERVR DAVDYAERRT ADNDRFTLNV ALAYGGRTEL LDAATAIARD VDAGDLDPTD
VDVETVEERL YDRPVRDVDL IVRTGGDERT SNFLPWHANG NEAAVYFCAP YWPEFSEVEF
LRAIRTYQSR EESWRQARAE RAVALVRAVA EVEIAEAHAV AGRLRDRLPL DADALAAALP
GDDEDAVEDR SEDGSPPETA TENAGQTPTG ERDAEPESAD
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