Gene Hlac_2037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2037 
Symbol 
ID7402056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2030143 
End bp2030481 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content69% 
IMG OID643709108 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002566685 
Protein GI222480448 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0486792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.209563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTAC TCCCAGACGC GGACGTCGAG GCGGTGGAGG CGGTCGACGG CGTGTTCCTC 
ACGCAGGGCG CCGCCGGCGA CGAGACGAGC ATCCAGCGGT TCGTCATCGA CCCGGGCGCC
GAAGTCCCCG AGCACGACCA CCCCCACGAG CAGGTCGGCG TGATCACCGA GGGGACAATC
ACCTTCGTCG TCGACGGCGA GGACCGCGTG GTTGAAGCCG GAGACACGTA TGTGATTCCG
GGCAGCGAGC CGCACGCGGC GCGCAACGAC GGCGACGAGG AAGTCGTCGG CTACGACATC
TTCTCGCCGC CGCGGGCGAA CCCGGACTGG CAGGAGTGA
 
Protein sequence
MDVLPDADVE AVEAVDGVFL TQGAAGDETS IQRFVIDPGA EVPEHDHPHE QVGVITEGTI 
TFVVDGEDRV VEAGDTYVIP GSEPHAARND GDEEVVGYDI FSPPRANPDW QE