| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1993 |
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| Symbol | |
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| ID | 7402012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1987356 |
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| End bp | 1988555 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643709064 |
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| Product | TrkA-N domain protein |
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| Protein accession | YP_002566641 |
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| Protein GI | 222480404 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1226] Kef-type K+ transport systems, predicted NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0873902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTGA CCCGTGATTG GGTGACCGTG CGGGCGTCGA TCCTCCTGAC GTTCGCGGTC
GCGATACTGT CGATCCTCGC CGGTCTCGCC CAGATCGGGG GGCTCGGCGT CGACGGTCCG
CTGTCCCTGT ACGTGCCCGC GGTCGTCCGC CAGACCGTCG GGTTCACTGG GACGATAACC
GGTTTCTCGA TGCTCGGGAG CAGCTTCGCG CTGCGGAACG GCTACCGCGT CGGTTGGTAC
TCCACGGCGG TCCTACTCCC GCTGACCGCG ATTCAGGGGC TGATGCAGGC GTCGGTGCTG
TCGTTCCCGC TGGTGGCGTT GTCGATCGTG TCGATGCCCG CACTCGCGTA CAATCGCGGT
CGATTCGACA GGCCGTTCTC GCCGTCGCCG ACCCAACTCG CTGCGGGCGC GGCGCTCGTG
ACCGCAATCT CGTACGGGAC GATCGGCACG TACGCGCTCC GCGACCAGTT CAACGGGGTC
GAGACCATCG TCGACGCGTT CTACTTCACC GTCGTCACCG CCTCCACGGT CGGCTACGGA
GACGTGACTC CGGTGGCCGG CGCGGCCGCC GACATCGCGC AGTTGTTCGT GCTCTCCTCG
CTCGTGATGA ACGTCGCCGC GTTCGCGGTG GCGCTCGGGG TTATTCTCAC CCCGGCTATC
GAGGCGCAGC TCTCCAAGGC GCTTGGAAAA ATGACCGATA AACAGATCGA CCTCCTCGAC
GACCATGTCC TCGTGCTCGG CTACGGGGAC CTGACCGAAC CGATCCTCGA AGAACTCGAC
GCCCGCGACG GGACCAAGTA CGCGGTCGTG ACCACCGACG AGACCGCTGC GAGGCGACTG
AGCGAACGCG ACGTGCCCGT ATTCACCGCG GACCCGAGCG ACGTCGACCC GCTCGAACGG
GTGAATATTC AGGGCGCCCG GGCGGTCGTC GTCGCAACGA ACGACGATGC GCGGGATGCG
CTCGCGATCC TCACCGCCAG ACAACTCAAC CCCGACGTGC GGATCGTCGC TGCGGTAACC
CAGCGAGAGA ACGTCAACAA GCTCCGCCGG GCCGGCGCGG ACCAGGTAAT CTCGCCCGCG
ACGCTGGGCG GCCACATTCT CATTGACTGC GCGTTCGGCG CGGACAGTGA GGACGCGACG
ACCGACCTCC TCGGCGATTC GATTGACGAC GTAGAAGAAC TCGACGACTC GTCCGCTTGA
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| Protein sequence | MELTRDWVTV RASILLTFAV AILSILAGLA QIGGLGVDGP LSLYVPAVVR QTVGFTGTIT
GFSMLGSSFA LRNGYRVGWY STAVLLPLTA IQGLMQASVL SFPLVALSIV SMPALAYNRG
RFDRPFSPSP TQLAAGAALV TAISYGTIGT YALRDQFNGV ETIVDAFYFT VVTASTVGYG
DVTPVAGAAA DIAQLFVLSS LVMNVAAFAV ALGVILTPAI EAQLSKALGK MTDKQIDLLD
DHVLVLGYGD LTEPILEELD ARDGTKYAVV TTDETAARRL SERDVPVFTA DPSDVDPLER
VNIQGARAVV VATNDDARDA LAILTARQLN PDVRIVAAVT QRENVNKLRR AGADQVISPA
TLGGHILIDC AFGADSEDAT TDLLGDSIDD VEELDDSSA
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