| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1990 |
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| Symbol | |
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| ID | 7402009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1984301 |
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| End bp | 1986130 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643709061 |
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| Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
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| Protein accession | YP_002566638 |
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| Protein GI | 222480401 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.902859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.104925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGAAC ACGACGTTAT CGTTGTCGGC GCCGGGGGGG CGGGACTCCG GGCGGCGATC
GCGGCACAGG AAGCGGGGGC CGACGTGGCC ATCGTCTCGA AGCTCCACCC GGTCAGATCG
CACACGGGCG CGGCCGAGGG CGGCATCAAC GCGGCACTGC GCGACGCCGA CTCATGGGAG
GACCACGCAT ACGACACGAT GAAGGGGTCC GACTACCTCG GTGACGCGCC GGCGGTCGAG
GCCCTCTGTC GGGAGAGTCC GGAAGAGGTC ATCCGGCTCG AACACTGGGG AATGCCCTTC
TCCCGCGAGG ACGACGGACG CGTCTCCCAG CGACCGTTCG GCGGGCTCTC CTTCCCCCGG
ACCACGTACG CCGGCGCGGA GACCGGCCAC CAGATGCTCC ACACGATGTA CGAGCAGGTG
GTCAAACGCG GGATCACGGT ATACGACGAG TGGCACGTGA TGGAACTCGC CGTCACCGAC
GAGGACGACC CGGCCGACCG GACCTGCCAC GGCGTCGTCG CCTACGACAT TCAGAGCGGC
GAGATCAGCG GCTTTAGCGC CAAGAACGGT GTCATTCTCG CGACCGGCGG GATGGGACAG
GTGTTCGATC ACACCACGAA CGCGGTCGCA AACACCGGCG ACGGCGTCGC GATGGCGTAC
CGCGCGGGCG TCCCGATGGA AGACATGGAG TTCATCCAGT TCCATCCGAC GACGCTCCCG
TCGACGGGCG TCCTCATCTC CGAGGGTGTC CGCGGTGAGG GCGGTATCCT CTACAACAGT
GAGGGCGAGC GCTTCATGTT CGAGCACGGC TACGCGAACA ACGACGGCGA GCTCGCTTCC
CGTGACGTGG TCTCCCGCGC CGAGCTGACC GAGGTCAACG AGGGGCGCGG GATCGAAGAC
GAGTACGTCC ACCTCGACAT GCGGCACTTG GGCGAGGAGC GCATTCTCGA CCGGCTGGAG
AACATCCTCC ACCTCGCGGA AGACTTCGAG GGCGCAGACG GGCTCACGGA GCCGATGCCG
GTCAAGCCCG GTCAGCACTA CGCGATGGGC GGCATCGAGA CGAACGAGTT CGGCGAGACC
GTCATCGGCG GCCTTTACGC CGCCGGTGAG TGCGCCTGCG CGTCGGTCCA CGGCGCGAAC
CGTCTCGGCG GCAACGCCCT GCCTGAGCTC ATCGTCTTCG GGAAGCGCGC CGGGCGTCAC
GCGGCCGGCG AGGAGATGGG CGAGGCCGAG GTCACGACCG GCAAGGACGG CGAGTGGGAG
CCCGCCGACT ACGAGTTCGA GGTCGAGGTC GGCGAGACCG GCGGGCAGGA TCCCGCCGCG
GCCGACGGCG GCGCGGTGGC GACGGACCCC GATGGCGTGC TCGAAGCGGA AGTTGAGAGC
GCCAAAGACC GCGTTGAGGA ACTGCTCTCG CGGAAGGGTC GCAACCACGC CGAGACCCGC
TCGAAGGTCC AGCAGACGAT GACCGCGAAC GTCAACGTGT TCCGCGAGGA GGGTCGGCTC
GAGGAGACGC TTAGCGACCT CCACGAGGCG CGAGAGACGT ACAAAGATGT CGCCGTCTCG
GACCCGTCCC GGACGTTCAA CACCGACCTC ATCCACACGA TGGAGACCCG GAACATCCTC
GACATTGCCG AGGCGCTGAC GATGGGCGCG CTCGCGCGAC GGGAGTTCCG CGGCGCTCAC
TGGCGCAAAG AGCGCCAGGA GCGCGACGAC GAGAACTGGC TGAAACACAC GCTCGTCTCG
TGGAACGACG GCGAGCCGGA GCTGTGGTAC AAGCCGACGA TCCTCGAAGG AGAGAACAAG
ACGTACGAAC CGAAGACCCG CTCGTACTGA
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| Protein sequence | MHEHDVIVVG AGGAGLRAAI AAQEAGADVA IVSKLHPVRS HTGAAEGGIN AALRDADSWE
DHAYDTMKGS DYLGDAPAVE ALCRESPEEV IRLEHWGMPF SREDDGRVSQ RPFGGLSFPR
TTYAGAETGH QMLHTMYEQV VKRGITVYDE WHVMELAVTD EDDPADRTCH GVVAYDIQSG
EISGFSAKNG VILATGGMGQ VFDHTTNAVA NTGDGVAMAY RAGVPMEDME FIQFHPTTLP
STGVLISEGV RGEGGILYNS EGERFMFEHG YANNDGELAS RDVVSRAELT EVNEGRGIED
EYVHLDMRHL GEERILDRLE NILHLAEDFE GADGLTEPMP VKPGQHYAMG GIETNEFGET
VIGGLYAAGE CACASVHGAN RLGGNALPEL IVFGKRAGRH AAGEEMGEAE VTTGKDGEWE
PADYEFEVEV GETGGQDPAA ADGGAVATDP DGVLEAEVES AKDRVEELLS RKGRNHAETR
SKVQQTMTAN VNVFREEGRL EETLSDLHEA RETYKDVAVS DPSRTFNTDL IHTMETRNIL
DIAEALTMGA LARREFRGAH WRKERQERDD ENWLKHTLVS WNDGEPELWY KPTILEGENK
TYEPKTRSY
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