Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1897 |
Symbol | |
ID | 7400091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1898149 |
End bp | 1899648 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643708968 |
Product | phytoene desaturase |
Protein accession | YP_002566545 |
Protein GI | 222480308 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.29228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTGG CCCCGGACAT CGACGCCGTG GCCGGCGAGT CCGTCGTCGT GATCGGCGGC GGATTCGGCG GCCTCTCGAC CGCCTGTTAC CTCGCTGACG CCGGCGCGGA TGTGACCCTC TTGGAGAAGA ACGAACAGCT CGGCGGGCGC GCGAGCCGGC TGGAGGCCGA CGGCTTCCGG TTCGACATGG GGCCGTCGTG GTACCTCATG CCCGACGTGT TCGAACGGTT CTTCGGCCAC TTCGGACGCG AACCGTCGGA GTTCTACGAA CTGGAGCGAC TCGATCCCCA CTACCGGGTG TTCTGGAAGG ACGGCGACAA GGTCGACGTG CTCCCCGACC GCGAGGCGAA CAAGGCCCTC TTCGAGGAGT ACGAGCCCGG TGCGGGCGAG GCGTTCGAAG CGTATCTGGA GGAGTCCGAA CGCACCTACG AGATCGGGAT GGAACACTTC GTGTACGAGG ACCGTCCGCG GCTCCGCGAC TACGTCGACA AGGACGTGCT CCGGTACTCG TGGGGGCTCT CGCTTCTCGG CAAGATGCAG GGACACGTCG AGGACTACTT CGACCACCCG AAGCTCCAGC AGCTGATGCA GTACACCCTC GTCTTCCTCG GTGGCTCCCC GACGAACACC CCCGCGCTGT ACAACCTGAT GAGCCACGTC GACTACAACA TGGGCGTCTA CTACCCCGAA GGCGGGATCG GCGCCGTCGT CGACGGCATC GTCGAACTCG GCGAGGACCT CGGCGTCGAG TTCGTCACCG ACGCCGAGGT GACGGCCATC GAGGGACGCC GCGGGGGCTT CGCGCTCGAC ACCGCCGACG GCGAGCGCTA CCTCACGGAT CTGGTCGTCT CCGACGCCGA CTACGCCCAC ACCGAACAGG AGCTGCTCCC GAAACACAAG CGCCAGTACA GCGACGAGTA CTGGGAGTCG CGGACGTACG CGCCCTCCGC GTTCCTGCTG TACCTCGGCG TCGAGGGCGA CGTGCCGAAC CTCGAACACC ACACGCTGGT GTTGCCGACG GGGTGGAACC ACCACTTCGA GCAGATATTC GACGACCCAG CGTGGCCCGA TGACCCCGCT TACTACCTCT GTGCGCCCTC CGAGACCGAC GACACGGTCG CGCCAGAGGG ACACAGCAAC CTGTTCGCCT TGGTCCCCAT CGCGCCCGGG CTGGAGGACA CTCCCGAACT GCGCGAAGAG TACCGCGACC TCGTGTTGGA CGACATCGCC GAGAACACCG ACACGGAGCT GCGCGACCGG ATCGTCTTCG AGGAGACGTT CTGCGTCGAC GACTTCGCGG ACCGGTACAA CAGCTACCAG GGAAGCGCGC TCGGGCTGGC ACACACCCTG CGACAGACTT CGCTGCTTCG CCCGCCCCAC CGGTCCGACG CGCTCGACGG GCTCTACTTC ACGGGGTCGA CGACGACCCC CGGTATCGGT GTCCCGATGT GTCTCATCAG CGGACAGCTG ACCGCCGAGG AGCTGTCGAA GACGGCGTGA
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Protein sequence | MDVAPDIDAV AGESVVVIGG GFGGLSTACY LADAGADVTL LEKNEQLGGR ASRLEADGFR FDMGPSWYLM PDVFERFFGH FGREPSEFYE LERLDPHYRV FWKDGDKVDV LPDREANKAL FEEYEPGAGE AFEAYLEESE RTYEIGMEHF VYEDRPRLRD YVDKDVLRYS WGLSLLGKMQ GHVEDYFDHP KLQQLMQYTL VFLGGSPTNT PALYNLMSHV DYNMGVYYPE GGIGAVVDGI VELGEDLGVE FVTDAEVTAI EGRRGGFALD TADGERYLTD LVVSDADYAH TEQELLPKHK RQYSDEYWES RTYAPSAFLL YLGVEGDVPN LEHHTLVLPT GWNHHFEQIF DDPAWPDDPA YYLCAPSETD DTVAPEGHSN LFALVPIAPG LEDTPELREE YRDLVLDDIA ENTDTELRDR IVFEETFCVD DFADRYNSYQ GSALGLAHTL RQTSLLRPPH RSDALDGLYF TGSTTTPGIG VPMCLISGQL TAEELSKTA
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