Gene Hlac_1826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1826 
Symbolrps2P 
ID7400018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1837348 
End bp1838154 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID643708896 
Product30S ribosomal protein S2 
Protein accessionYP_002566475 
Protein GI222480238 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01012] ribosomal protein Sa(cytosolic)/S2(archaeal) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAG ACAACGACGC GGTCGAACTC GACGACGACG CGGAGACCGA GGCGGTCGAC 
GCGGCGGTCG AGGAGGAGGC CGACACGACC GAGGAACCGA CCGCCGACGC GGCTGCCGAG
GAGGCACCCG CCGACGCCGA ACCCGACGCG ACGGAAGACG CGGGCGACGA CGCCGACGAG
GAGGAAGACG CCTCCCCGTT CGACGACGAC GTCATGCCCG ATGACGACGT CGACCTGCTG
ATCCCGGTCG AGGACTACCT CTCTGCCGGT GTCCACATCG GGACCCAGCA GAAGACGAAG
GATATGGAGC GGTTTATCCA CCGCGTCCGC GACGATGGCC TGTACGTACT CGACGTGAGT
ACGACGGACC AGCGGATCCG CACAGCCGCG GACTTCCTCA AGAACTACAA CCCTGAGCAA
ATCCTCGTCA CGTCCTCGCG GCAGTACGGT CGGTTCCCGG CCGAGAAGTT CGCGGACGCC
ATCGGCGCCC GCGCCCGCAC GGGACGCTTT ATCCCCGGCA CGCTGACGAA CCCCGACTAC
GCCGGCTACA TCGAGCCGGA TGTCGTCGTG GTCACGGACC CGATCGGGGA CGCACAGGCC
GTCAAGGAGG CCATCACTGT CGGCATCCCG GTCATCGCGA TGTGCGACTC CAACAACCAG
CTATCGAACG TCGATCTGGT TATCCCGACG AACAACAAGG GTCGACGCGC GCTGTCGGTC
GTCTACTGGC TGCTCGCCAA CGAGACGCTC GACCGCCGCG GCGCCGACAC TGTGTTCGCC
CTCGACGACT TCGAGGACGA ACTGTAA
 
Protein sequence
MTEDNDAVEL DDDAETEAVD AAVEEEADTT EEPTADAAAE EAPADAEPDA TEDAGDDADE 
EEDASPFDDD VMPDDDVDLL IPVEDYLSAG VHIGTQQKTK DMERFIHRVR DDGLYVLDVS
TTDQRIRTAA DFLKNYNPEQ ILVTSSRQYG RFPAEKFADA IGARARTGRF IPGTLTNPDY
AGYIEPDVVV VTDPIGDAQA VKEAITVGIP VIAMCDSNNQ LSNVDLVIPT NNKGRRALSV
VYWLLANETL DRRGADTVFA LDDFEDEL