Gene Hlac_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1801 
Symbol 
ID7399674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1816597 
End bp1817331 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID643708867 
Productbeta-lactamase 
Protein accessionYP_002566450 
Protein GI222480213 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.204896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGA ACGCCGACGC CAGTCTCACC CTCGTCCGCA ACGCCACGGT CCTCGCGACC 
GTGGGCGAGA CGACTTTCCT CGTCGATCCG CTGTTCGCGC CGCAGGGCGC GTTGCCGCCG
ATCGATGACA CACCGAACGA CCGCGCGAAC CCCCTCGTGC CGATGCCAGA CGTCGACAGG
TCGCACGACG CGGTGATCGT TACCCACCGC CACCCCGATC ACTTCGACGA CGCGGCGAAG
GCGGAGTTGG ATCCGGACGT CCCGCTGTTT TGCCAGCCCA CCGAGGCCGA CGCGTTCGTC
GACGAGGGGT TCACCGACGT GCGGCCCGTC GAGGACGCGG CGTCGTTCGC GGGGGTCACC
CTCCACCGGA CGCCCGGCCG TCACGGCCAC GGGGAACGGG CCGAGCGGAT GGGACCGGTC
TCCGGGTTCG TCCTCGAAGG CGACGAGACG CTGTACCTCG CCGGCGACAC GGTCTGGTAC
GAGCCGGTCG CGGAGACACT GGCCCGGTTC GAGCCCGACG CGGTCGTCCT CAACGGCGGC
GCGGCGCGGT TCAACGAGGG GGAGCCGATC ACCATGGGCG TCGACGACGT CGCCGCCGTC
CGCGAGGCCA CCGACGCCGC GATCGCCGTG GTCCACATGG AGGCGATCAA CCACTGTCTG
CTCTCGCGCG AGGAGTTACG GTCGGAGACA GAGGACGTGC TGGTCCCGGA AGACGGGGAA
GAGATCGAAC TGTAG
 
Protein sequence
MSTNADASLT LVRNATVLAT VGETTFLVDP LFAPQGALPP IDDTPNDRAN PLVPMPDVDR 
SHDAVIVTHR HPDHFDDAAK AELDPDVPLF CQPTEADAFV DEGFTDVRPV EDAASFAGVT
LHRTPGRHGH GERAERMGPV SGFVLEGDET LYLAGDTVWY EPVAETLARF EPDAVVLNGG
AARFNEGEPI TMGVDDVAAV REATDAAIAV VHMEAINHCL LSREELRSET EDVLVPEDGE
EIEL