Gene Hlac_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1781 
Symbol 
ID7399654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1799556 
End bp1800410 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content59% 
IMG OID643708847 
Productzinc/iron permease 
Protein accessionYP_002566430 
Protein GI222480193 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.080702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTG AGCTTACGGA GATGTTTATC CAAGTCGTCG GGACATCCCC GGTGATACAG 
GCACTCGCTG GGGGTATCAT CATTGCCCTA ATGAATCTCT TCGGTGCGTC GCTCATTCTC
GTCTGGCGAG ATCCGTCTGA ACGGGCCCTC AATGGTCTGC TTGGATTCGC GGCCGGTGTA
ATGCTCGCAG CAGCCTTTAC CAGCCTCATA ATCCCTGGTA TCGAAGAGTA TTCTGGAGGG
AACCCGGTTC CGACGCTTAT CGGTGTGGGG ATCGGCGCAC TATTTCTCGA TCGGGCGGAC
GCACTGGTTC CCCACGCACA CTATCTTCTG ACTGGCGCTC GTCGAACGGA CGCAGCGAAA
CCGAAGGAGA CGCTCCCAGT CACTGACCAG CGGTTGGCCG GCGTCGTCCT GTTCATTTTA
GCCATCACGC TGCATAACAT CCCTGAAGGG TTAGCCGTTG GTGTCGGGTT CGGCGCAGCC
GGGGGAAATC CGGCACAGCT CGGAAGCGCG CTGTCGTTGA TGGTTGCGAT CGGTCTCCAA
AATATTCCTG AGGGATTGGC TGTGTCTGTG GCAGCGGTAA ACGCCGGCCT CGACCGTCGG
CTGTACGCTG CAATCGCCGG TATCCGGGCC GGAGCCGTCG AGATCCCATT AGCGGTGCTG
GGGGCTGTCG CCGTGGCGAC AATCGAGCCG CTATTGCCAT ACGCAATGGG GTTCGCCGCT
GGGGCGATGT TGTTCGTCAT CTCTGACGAA ATCATCCCTG AGACCCACAG GAGTGGGTAC
GAACGCACAG CGACGCTCGG ACTCATGGCG GGCGTCATCA TTATGCTGTA CTTGGATATC
GCGTTAGCTA GTTGA
 
Protein sequence
MTLELTEMFI QVVGTSPVIQ ALAGGIIIAL MNLFGASLIL VWRDPSERAL NGLLGFAAGV 
MLAAAFTSLI IPGIEEYSGG NPVPTLIGVG IGALFLDRAD ALVPHAHYLL TGARRTDAAK
PKETLPVTDQ RLAGVVLFIL AITLHNIPEG LAVGVGFGAA GGNPAQLGSA LSLMVAIGLQ
NIPEGLAVSV AAVNAGLDRR LYAAIAGIRA GAVEIPLAVL GAVAVATIEP LLPYAMGFAA
GAMLFVISDE IIPETHRSGY ERTATLGLMA GVIIMLYLDI ALAS