Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1687 |
Symbol | |
ID | 7400444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1706654 |
End bp | 1707526 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643708756 |
Product | Rhodanese domain protein |
Protein accession | YP_002566342 |
Protein GI | 222480105 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0301278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGATG ATGTACTCGT CACGGCGGAT TGGGTGGAAT CGAACCTCGA CGCGTTCCAG GACGACGACT CGGACCTCCG GCTCGTCGAG ATCAACAACC CGACCGTCAC CGACGAGTCG GAGTATACGC CCTACGAAGA GGGCCACATC CCGGGCGCGC TGAACTTCGA GTGGGACGAG GTCTTCACCG ATGAGACGGA GCGCGACATC GTCTCGAAGG CGGACTTCGC CGAGCGAAAC GGCGCGGCCG GCATCGACGC CGACACGACG GTCGTGGTGT ACGGCGGCGG TCGCGTCCCG AACTGGTTCG CGCTGTTCGG CTACTGGATC TACACGTACT ACGGCCACGA CGACGTGCGC GTGATCGACG GCGGGAAGGG GTACTGGGTC GACAACGACT ACCCGCTCTC CACCGAGGCG CCCGACTTCA CGTCCCGCGA GTACGAGGCC CGCGGTCCCT TCGAGAGCGT CCGCGCGTAC AAGGACGACA TCGACAAGGC GATCGAGGAG GGGATTCCGA TGGTCGACGT GCGCTCGCCC GAGGAGTTCT CCGGCGAGGT CATCGCCCCC GAGGGGCTCA ACGAGACGGC CCAGCGCGGC GGCCACATCC CCGGCGCGAG CAACGTCCCG ATCGGGACCA CCCTGAACGA GGACGGCACG TTCAAGAGCG CCGACGAGCT CCGCGAGCTG TACGCGGACG CCGGCGTCGA CGGCGACGAG TCGACGATCA CCTACTGCCG CGTCGGCGAG CGCTCGTCGA TCGAGTGGTT CCTGCTCCAC GAGCTGCTCG GCTACGACGA CGTTCGCAAC TACGACGGCT CGTGGACCGA GTGGGGGAAC CTCGTCGGAG CGCCGATCGA GACCGGCGAG TAA
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Protein sequence | MTDDVLVTAD WVESNLDAFQ DDDSDLRLVE INNPTVTDES EYTPYEEGHI PGALNFEWDE VFTDETERDI VSKADFAERN GAAGIDADTT VVVYGGGRVP NWFALFGYWI YTYYGHDDVR VIDGGKGYWV DNDYPLSTEA PDFTSREYEA RGPFESVRAY KDDIDKAIEE GIPMVDVRSP EEFSGEVIAP EGLNETAQRG GHIPGASNVP IGTTLNEDGT FKSADELREL YADAGVDGDE STITYCRVGE RSSIEWFLLH ELLGYDDVRN YDGSWTEWGN LVGAPIETGE
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