Gene Hlac_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1612 
Symbol 
ID7399561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1632232 
End bp1632615 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content67% 
IMG OID643708678 
Productglycine cleavage system protein H 
Protein accessionYP_002566267 
Protein GI222480030 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.645617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.608002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCG AAGTTCCCGA CGACAGACGG TACCTGGAAT CGCACGAGTG GGTGACGACC 
GGCGGCGACA CCGTTCGGAT CGGCGTCTCT GACTTCGCGC AAGACGAGCT CGGCGACGTG
GTGTTCGTCG AACTGCCCGA GGCCGGCGAC GAGATCACCG CCGGCGAGGC GTTCGGCGTC
GTCGAGTCGA TCAAGGCCGT TTCGGACCTG TACGCACCGG TGTCCGGCGA GGTCGTCGCC
GTCAACGAGG AGCTGTTCGA TCGCCCGGAG CTCGTCAACG AGGATCCGTA CGGGGACGGG
TGGCTGCTCG AAGTCGAGCC CGTCGAGGGC GGCGACGCCG AGGGGCTGCT CGACGCCGAC
GAGTACGACG ACCAGATCGC TTGA
 
Protein sequence
MSFEVPDDRR YLESHEWVTT GGDTVRIGVS DFAQDELGDV VFVELPEAGD EITAGEAFGV 
VESIKAVSDL YAPVSGEVVA VNEELFDRPE LVNEDPYGDG WLLEVEPVEG GDAEGLLDAD
EYDDQIA