| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1496 |
|---|
| Symbol | |
|---|
| ID | 7400324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1503314 |
|---|
| End bp | 1503748 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643708558 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_002566154 |
|---|
| Protein GI | 222479917 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.828394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACTCCC AGATCCTCGT GCCGACCGAC GGCAGTCCGG CCTCGGACGC CGCGATCGAG
CACGCGATCG ACCTCGCCCG GCACTACGAC GCCCGCCTTC ACGCCCTCTA CGTCGTCGAC
GGCGCGGCGT ACTCGACGCT CGAAGCGGGC GCCGACATCG TCGTCGAGGC GCTCGAGTCC
GAAGGGAAAG AGGCCACCCG TCGCGTCGCC GACGCCGCCG CGGACGCGGG CGTCGACTCC
GAGACGACGG TCGCCACGGG CACCGCCTAC CGGTCAATCC GCGACTACGT CGACGAGAAC
GACATCGACG TGATCGTGAT GGGGACGCAC GGCCGGAAGG GGCTCGACCG CTACCTGCTC
GGCAGCGTCA CGGAGCGGGT CGTCCGGACC TCCGACGTGC CGGTACTGAC GGTGCGCCAA
CCCGCCGATG AGTAG
|
|---|
| Protein sequence | MYSQILVPTD GSPASDAAIE HAIDLARHYD ARLHALYVVD GAAYSTLEAG ADIVVEALES
EGKEATRRVA DAAADAGVDS ETTVATGTAY RSIRDYVDEN DIDVIVMGTH GRKGLDRYLL
GSVTERVVRT SDVPVLTVRQ PADE
|
|---|
| |