Gene Hlac_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1481 
Symbol 
ID7400309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1490434 
End bp1491951 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content71% 
IMG OID643708543 
Productprotein of unknown function DUF790 
Protein accessionYP_002566139 
Protein GI222479902 
COG category[S] Function unknown 
COG ID[COG3372] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTACGCA AAGACCTCCT GCGCGTCTCG CGGGCCGGCG GCGGGTACCG GCCGCGCTTT 
GCGACCCGCG AGCACCGTCC GCTCGCGGCG CGGGTGCTCG GGACCTTCGA GTCCCACGTC
GGGGAGCGGC GCGGTGACCT CGACGACGCG CTGGCGGCGC TGGAGGCCGA CGCCGCCGAG
TCCGGCGGCG ACTTCAAGCT CGTCCGCGGG CTCGCGGCCT TGATCGAGCG CGAGTGCGTC
TTCGAGACGC GCGCGCCGGT CCCGCCCCAG CGCGTTCGGC GCGCGGCGTT CGAGGCCGCG
GAGGCCGTCG GCGTCGCGAG CGAGACCGAG CGCGAAACCG CGATCGACCG CGCCGCCGAC
GCGCTCGGGA TCGAGCCCGG GGACGTGGAG GCGTCGCTGT ACGCCGACCG CGACGTCAAC
GAGATCCTCG TCGACGCCGA CGTGCGGTGG GACCCGGACT CCCTCCTCGA ACAGTACGAC
CTCTCGCTCG CACAGACCGC GCTGTTCGAC GCCACCGAGG TCCGGATCCG ATCGAACGAC
CCGAAACGGC TCGTCTCGGC GGTCAAGCGG CTCCGGCTGA TGTACGAGGT GGAGACAACC
CCCGAGGGCC GAGAACTGGT CGTCACCGGG CCGGACGCGC TGTTCTCGCG CACCCGGCGC
TACGGGACCG CGTTCGCGCG ACTGCTCCGG ACCGTCGCGA AGTCCGCGGA GTGGGAGCTG
TCGGCGACGA TCGACGACCG CGGCCGCGAG CGCACCATGC GCCTCTCCGA CGGCGACGTG
ACGGTTCCGG GCGTCGAACC GGTCGCGGAG CCGGACTTCG ACAGCGGCGT CGAGGCCGAC
TTCGCCGGGC GGTTTCGCGG GCTCGACCTC GACTGGACCT TGGTGCGCGA GCCGGAAACC
CTCGAAACCG GAAACCGGGT GATGATCCCC GACTTCGCGT TCGACTACGA CCACGCCGAC
TTCCGGCTGT TCTTCGAGGT GATGGGGTTT TGGACCCCCG AGTACGTCGC GAAGAAACTC
GGCCAACTCG CTGACGTGGA AGATGTGGAT CTGCTGGTCG CCGTCGACGA GAGCCTCGGC
GTCGGTGAGG AGATCGCCGC GCGGGACCAC CGCGTGGTGA GCTACTCGGG GACCGTCCGC
GTGAAAGCGA TCGTCGACGT GCTCCGCGAG TACGAGGCCG AGTTCGTCGC CGATGCGGCC
GCCGACCTCC CCGAGTCGCT CTCGCCGGAC GCGGACGCGA TCGGGCTCGA CGAACTCGCG
GACGAGCACG GCGTGAGCGT CGAGGCGATC GAGGACAAGT CGTTTCCGGA CCACGAACTG
GTGGGGCGGA CCCTCGTGCG GCCTGCGGTA CTGGAGGCGG CGGGCGAGAA GCTTGAAGCC
GGAATGGCGT TCTCGGAGGT TGAGTCAATA CTCGACGACT ATGCGATCGA CGACGCGAGC
GCCGCCCTCT CGCGGCTCGG GTTCCGGGTC GAGTGGGAGG GGCTCGGCGG CGGGACGGTC
CGAGAAAAAG GCGAGTAG
 
Protein sequence
MLRKDLLRVS RAGGGYRPRF ATREHRPLAA RVLGTFESHV GERRGDLDDA LAALEADAAE 
SGGDFKLVRG LAALIERECV FETRAPVPPQ RVRRAAFEAA EAVGVASETE RETAIDRAAD
ALGIEPGDVE ASLYADRDVN EILVDADVRW DPDSLLEQYD LSLAQTALFD ATEVRIRSND
PKRLVSAVKR LRLMYEVETT PEGRELVVTG PDALFSRTRR YGTAFARLLR TVAKSAEWEL
SATIDDRGRE RTMRLSDGDV TVPGVEPVAE PDFDSGVEAD FAGRFRGLDL DWTLVREPET
LETGNRVMIP DFAFDYDHAD FRLFFEVMGF WTPEYVAKKL GQLADVEDVD LLVAVDESLG
VGEEIAARDH RVVSYSGTVR VKAIVDVLRE YEAEFVADAA ADLPESLSPD ADAIGLDELA
DEHGVSVEAI EDKSFPDHEL VGRTLVRPAV LEAAGEKLEA GMAFSEVESI LDDYAIDDAS
AALSRLGFRV EWEGLGGGTV REKGE