Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1472 |
Symbol | |
ID | 7400299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1478613 |
End bp | 1480496 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643708533 |
Product | glutamyl-tRNA(Gln) amidotransferase subunit E |
Protein accession | YP_002566130 |
Protein GI | 222479893 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2511] Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) |
TIGRFAM ID | [TIGR00134] glutamyl-tRNA(Gln) amidotransferase, subunit E |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACGG ACGCGACCCC CGAGTACGAC CACGAGGAGC TGGGGCTCGT CGCCGGGCTG GAGATCCACC AGCAGCTCGA CACGGCGACG AAGCTGTTCT GTGACTCCCC GACGACCGAG CGCGACCCCG AGGATTCCGA CCGCGAGATC ACCCGCCGGC TTCACCCGAC GAAGAGCGAA CTCGGCGAAC TCGACGACGC CGCGATGGAG GAGAGCCGTG TCGACCGCGA GTTCACCTAC CTCGCGTACG ACACCACCTG CCTCGTCGAG GAGGACGACG AGCCACCCCG CCGCATCGAT GGCGAGGCCC TCTCGGTGGC CCTCCAGGTC GCCGACCTGC TCGACATCTC CGTCGTCGAT CAGGCGCACG TCATGCGAAA GCTCGTCATC GACGGCTCGA ACACCTCCGG GTTCCAGCGC TCGATCCTGC TGGGCCAAGC GGGCGAGATC GAGACGAGCG AGGGACGCGT GTCGATCGCG GACCTCATGC TCGAAGAGGA GTCGGCAAAG CGCGTCGAAG AGACGGAAGA GGGCGTCGTC TACTCGCTCG ACCGGCTCGG CGTTCCCCTC GTCGAGATCG GAACGGGGCC GGACATCCGG AGCCCCGAGG GTGCGCGCGA GGCGGCCGAG CGCATCGGCA TGCTGCTCCG GTCGACGGGC GCGGTCAAGC GCGGACTCGG CACGATCCGG CAGGACGTGA ACGTCTCCAT CGCCGACGGC GCCCGCGTCG AAGTGAAGGG CGTACAGGAC CTCCAGGGGA TCGAGGACAT CGTCCGCGGC GAGGTCGGTC GGCAGGCCGA ACTGCTCGAA ATCCGCGACG AACTGGTCGA GCGCGACGCG AGCGTCGGCG ACGTGCGCGA CGTGACCGAC ACCTTCGCCG ACACCGAGTC CGGGGTTATT CGCGGCGCGC TCGACTCGGG CGGGAAGGTC ACCGCGGTTC CCCTGTTCGG CTTCGACGGA CTCGTCGGGC GCGAGATCCA GCCGGACCGT CGGCTCGGCA CGGAATTGTC CGACCACGCG AAGCGCCACG GCGCGGGCGG CATCTTCCAC ACCGACGAGC TGCCGGCGTA CGGCGTGACC GAAGAGGAGG TCGCCGCGCT GCGCGATGCG GTCGGGGCGG ACGAGGACGA CGCGGTCGCC ATCGTCGCGG CCGACCCCGA GACCGCCGAC CTGACGATCG AAGCCGCCGC CGAGCGCGCC GAGACCGCCA TCGAGGGTAT CCCCGAGGAG ACCCGCGGTG CGAACGACGA TGGGACGACT CGGTACCTCC GGCCGCTGCC CGGCGCGGCG CGGATGTACC CCGAGACGGA CGTGCCGCCG GTCGAGCCGG ACCCCTCCGA CGTGGACCGG CCGGAGCTGC TCGACGAGAA GGCCGAGCGG TACACTGAGG CGTTCGGGCT CGACGCCGGC CTCGCCGAGC AGGTCGCGTT CGGCCAGCGG TTCCCCCTGT TCGAGACCGC GGTCGACCGC GGCGTCGACC CCACCTTCGC GGCCTCGACA CTGGAGTCGA CGACGACGGA GATCCGGCGC GACGGCGCGC CCGTCGAGAA TCTGAGCTAT GAGCACTTCC TCGACCTGTT CGACCTCGTG GAGGACGGCG ACCTCGCGAA GGAGGGCGTC CCGAAAGTGC TGACGACGCT CGCGGAGGAC CCGTCGCTGT CGGCGGCCGA GGCGGTCGAG GAGGCCGGGC TGTCGGGCGT GAGCGAGGCG GAGGTCCGGG AGGCCGTGGT GGAGGTCGTC GAGCGCAACG CCGACCAAAT CGAAGCCGAG GGGATGGGCG CCTTTTCCGG ACTGATGGGC GAGGCGATGG GCGCGCTCCG CGGGAAGGCC GACGGCGAGA TCGTCTCCGA CGTGCTGCGC GAGGAGATCG GCAAGCGGTC GTAG
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Protein sequence | MSTDATPEYD HEELGLVAGL EIHQQLDTAT KLFCDSPTTE RDPEDSDREI TRRLHPTKSE LGELDDAAME ESRVDREFTY LAYDTTCLVE EDDEPPRRID GEALSVALQV ADLLDISVVD QAHVMRKLVI DGSNTSGFQR SILLGQAGEI ETSEGRVSIA DLMLEEESAK RVEETEEGVV YSLDRLGVPL VEIGTGPDIR SPEGAREAAE RIGMLLRSTG AVKRGLGTIR QDVNVSIADG ARVEVKGVQD LQGIEDIVRG EVGRQAELLE IRDELVERDA SVGDVRDVTD TFADTESGVI RGALDSGGKV TAVPLFGFDG LVGREIQPDR RLGTELSDHA KRHGAGGIFH TDELPAYGVT EEEVAALRDA VGADEDDAVA IVAADPETAD LTIEAAAERA ETAIEGIPEE TRGANDDGTT RYLRPLPGAA RMYPETDVPP VEPDPSDVDR PELLDEKAER YTEAFGLDAG LAEQVAFGQR FPLFETAVDR GVDPTFAAST LESTTTEIRR DGAPVENLSY EHFLDLFDLV EDGDLAKEGV PKVLTTLAED PSLSAAEAVE EAGLSGVSEA EVREAVVEVV ERNADQIEAE GMGAFSGLMG EAMGALRGKA DGEIVSDVLR EEIGKRS
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