Gene Hlac_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1427 
Symbol 
ID7400746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1437613 
End bp1438611 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content68% 
IMG OID643708488 
ProductABC transporter related 
Protein accessionYP_002566085 
Protein GI222479848 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG TGGAGGGGCT GCGGAAGACG TACGGCGACT TCGCGGCCGT CGTCGACAGC 
ACCTTCTCCG TCGCGGAAGG CGAGGTGTTC GGCATCGTCG GCCCGAACGG CGCCGGGAAG
ACGACGACGC TGAAGGTGCT CGCCGGGCTC GTCGACCCCA GCGACGGCGA GGTCGAGGTC
GCCGGCTTCG CCTCGGACGA CCCGGAGATG CGCCGGCAGT TGGGGTTTCT CCCCGAGGAG
TCGCCCCTCT ACGAGGAGAT GACGCCGCTG TCGTATCTGC GCTTCTTCGC CGACCTGTAC
GACGTGCCGC GAAAGGCCGC GAACGAGCGG ATCGAGGCCG CGCTCGACCG ACTCGAACTG
GACCACCGTG AGCGCCGCCT CGGCGACATG TCGAAGGGGA TGAAACGCAA GGTCGCCATC
GCCCGGTCGC TGGTCAACGA CCCCGACGTG CTCGTGTACG ACGAGCCGGC CTCGGGGCTC
GATCCGGTGA CGACGAACTC CGTGCTTGAG TTCACCCGCG AGCTGCGTTC GACCGGAAAG
ACCGTCGTGT TCTCCGCGCA CAACCTCTAT CACGTCGAAT CCGTCTGCGA TCGCGTCGCG
GTGATGGACG AGGGCCGGAT CGTCGCCCGC GGCAGCGTCG ACGGGATCCG CGAGCGACAC
GGCGAGACGA CCTACCGCGT GTTCACCGAC GTGTCTCCGG CCCGAACCGA CGCGCTGGCA
GATATCTTCG ACGACATCGA CGCCGCGATC GAGGAAGTCG GCGACCGGTT CCGCACGACT
GTCCCGACGA TGGACGCGGT CGCGGCGGTT CGCGAAGCCG CCGCCGCGGC GGGCGGCGAG
GTCGTCGACA TCCGCACGCG AGAGCCGAGC TTGGAGGACG TGTTCCTCGA CATCGTCGGG
CGGCCGATGC CGGGGCGGTA CACCGGGGGC GGTGGGGACG CAGCGTCGAC TGCGGAGACA
GAGACGGATC GGTTGACGGA ATCGGAGGAG GCCGAGTGA
 
Protein sequence
MIEVEGLRKT YGDFAAVVDS TFSVAEGEVF GIVGPNGAGK TTTLKVLAGL VDPSDGEVEV 
AGFASDDPEM RRQLGFLPEE SPLYEEMTPL SYLRFFADLY DVPRKAANER IEAALDRLEL
DHRERRLGDM SKGMKRKVAI ARSLVNDPDV LVYDEPASGL DPVTTNSVLE FTRELRSTGK
TVVFSAHNLY HVESVCDRVA VMDEGRIVAR GSVDGIRERH GETTYRVFTD VSPARTDALA
DIFDDIDAAI EEVGDRFRTT VPTMDAVAAV REAAAAAGGE VVDIRTREPS LEDVFLDIVG
RPMPGRYTGG GGDAASTAET ETDRLTESEE AE