Gene Hlac_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1343 
Symbol 
ID7399438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1358065 
End bp1358607 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID643708407 
Productnucleotide kinase 
Protein accessionYP_002566005 
Protein GI222479768 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1936] Predicted nucleotide kinase (related to CMP and AMP kinases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGGA CCGAGCGCGA CGAAGCTGAC TCCCCAATCC GCGTCGCGGT CACCGGCACC 
CCGGGAACCG GCAAGTCGAC CGCGACGGCA CTGCTCGCTG ACGAGTACGA CGTGATCCAT
CTTAACGACC GCATTAAAGG CGACGACGAC CTCTGGACCG AGCGCGACGC CGACCGGGAC
ACGCTCGTCG CCGACCTCGA CGCGGTCCGC GAGCACCTCG GCGACTGGTC CGGCGTGCTC
GACTCCCACC TCGCGCACCG GTTCGACGTC GACCGCGTGG TCGTCCTCCG GTGTCACCCG
GAGACGATCG AGCGGCGGCT CCGCGAGCGT GGCGAGTCGG ACGCGACCGC CGAGGAAAAT
GCGGAGAGCG AGGCGCTCGA CGTGATCCTC TCGGAGGCGG TCGCCGAACA CGGCATGGAC
AACGTCTACG AGATCGACAC CACTGACCGC GACCCGGAGT CCGTGGCCGA CGCGATCCGC
GCGGCGATCG AGGGCGATCG CGAGCCGAGC GCGGGGACCG TCGACTTCAT GGATTATATA
TGA
 
Protein sequence
MSGTERDEAD SPIRVAVTGT PGTGKSTATA LLADEYDVIH LNDRIKGDDD LWTERDADRD 
TLVADLDAVR EHLGDWSGVL DSHLAHRFDV DRVVVLRCHP ETIERRLRER GESDATAEEN
AESEALDVIL SEAVAEHGMD NVYEIDTTDR DPESVADAIR AAIEGDREPS AGTVDFMDYI