Gene Hlac_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1320 
Symbol 
ID7399415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1332793 
End bp1333281 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID643708384 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_002565982 
Protein GI222479745 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0636599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCG AGCGCGAGGT ACTCGACGTG TTGGCGCGGA ACGCCCGCGA AGACATCGAC 
GACATCGCGG CCCAGACGGG CTTCGACGCG GCAGCGGTAG CGGAAGCGAT CGACGCGCTG
GAGGCGGATA ACGTGGTTCA CGGCTACCAA GCGGTCGTCG ACTGGGACCG CGTCGACGAG
GGGAAGATCC GGGCGCTCGT CGAGATCAAC GTCGAACTCG ACCGCGAGAC CGGCTACGAG
CAGGTCGCCG ACCGGATCGC GAAGTTCCCC GCGGTCGACG CCCTCCACCT CGTTTCCGGT
GATTACGACT TCGCCGTCGA GGTGCTCGGC GAGACGATGC AGGACGTCTC GCGGTTCATC
TCCGAGCAGG TCGCGCCCAT GCCGGAGGTC ACCCAGACGG TGACCCACTA CATCATGGAG
ACCTACAAGG ACGGCGGGAT ACGGTTCGAG GACGGCGACG ACGACGACCG CCTCTCCGTC
TCGCCATGA
 
Protein sequence
MDAEREVLDV LARNAREDID DIAAQTGFDA AAVAEAIDAL EADNVVHGYQ AVVDWDRVDE 
GKIRALVEIN VELDRETGYE QVADRIAKFP AVDALHLVSG DYDFAVEVLG ETMQDVSRFI
SEQVAPMPEV TQTVTHYIME TYKDGGIRFE DGDDDDRLSV SP